Protein–RNA interactions for Protein: Q12428

PDH1, Probable 2-methylcitrate dehydratase, yeastyeast

Known RBP Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PDH1Q12428 YDL159W-AYDL159W-A 132 nt-0.73□□□□□ -2.53
PDH1Q12428 YGR122C-AYGR122C-A 129 nt-0.73□□□□□ -2.53
PDH1Q12428 tP(UGG)QtP(UGG)Q 72 nt-0.74□□□□□ -2.53
PDH1Q12428 snR53snR53 91 nt-0.75□□□□□ -2.53
PDH1Q12428 snR77snR77 88 nt-0.78□□□□□ -2.53
PDH1Q12428 YDL114W-AYDL114W-A 114 nt-0.79□□□□□ -2.54
PDH1Q12428 YNR077CYNR077C 255 nt-0.84□□□□□ -2.54
PDH1Q12428 CDC65tQ(CUG)M 72 nt-0.87□□□□□ -2.55
PDH1Q12428 tV(UAC)QtV(UAC)Q 76 nt-0.87□□□□□ -2.55
PDH1Q12428 YBR223W-AYBR223W-A 120 nt-0.9□□□□□ -2.55
PDH1Q12428 YMR315W-AYMR315W-A 108 nt-1.01□□□□□ -2.57
PDH1Q12428 tY(GUA)QtY(GUA)Q 84 nt-1.06□□□□□ -2.58
PDH1Q12428 YLR149C-AYLR149C-A 87 nt-1.06□□□□□ -2.58
PDH1Q12428 snR6snR6 112 nt-1.2□□□□□ -2.6
PDH1Q12428 YOR335W-AYOR335W-A 81 nt-1.21□□□□□ -2.6
PDH1Q12428 RPL41BYDL133C-A 78 nt-1.23□□□□□ -2.61
PDH1Q12428 YOR309CYOR309C 381 nt-1.3□□□□□ -2.62
PDH1Q12428 YKL096C-BYKL096C-B 150 nt-1.32□□□□□ -2.62
PDH1Q12428 snR73snR73 106 nt-1.36□□□□□ -2.63
PDH1Q12428 YBR126W-BYBR126W-B 144 nt-1.49□□□□□ -2.65
PDH1Q12428 snR40snR40 97 nt-1.59□□□□□ -2.66
PDH1Q12428 snR75snR75 89 nt-1.78□□□□□ -2.69
PDH1Q12428 snR58snR58 96 nt-1.86□□□□□ -2.71
PDH1Q12428 tC(GCA)QtC(GCA)Q 76 nt-2□□□□□ -2.73
PDH1Q12428 YDR543CYDR543C 300 nt-2.02□□□□□ -2.73
PDH1Q12428 snR87snR87 109 nt-2.08□□□□□ -2.74
PDH1Q12428 YOL166W-AYOL166W-A 156 nt-2.33□□□□□ -2.78
PDH1Q12428 YJR162CYJR162C 351 nt-2.71□□□□□ -2.84
PDH1Q12428 YJL136W-AYJL136W-A 84 nt-2.91□□□□□ -2.88
Retrieved 29 of 7,029 protein–RNA pairs in 2.6 ms