Protein–RNA interactions for Protein: Q12112

TY1B-NL1, Transposon Ty1-NL1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-NL1Q12112 YOR231C-AYOR231C-A 201 nt-4.81□□□□□ -3.18
TY1B-NL1Q12112 YGL007C-AYGL007C-A 87 nt-4.83□□□□□ -3.18
TY1B-NL1Q12112 YCL001W-BYCL001W-B 255 nt-4.86□□□□□ -3.19
TY1B-NL1Q12112 YOR225WYOR225W 330 nt-4.86□□□□□ -3.19
TY1B-NL1Q12112 YMR046W-AYMR046W-A 129 nt-4.9□□□□□ -3.19
TY1B-NL1Q12112 snR40snR40 97 nt-4.91□□□□□ -3.19
TY1B-NL1Q12112 snR64snR64 101 nt-5□□□□□ -3.21
TY1B-NL1Q12112 snR62snR62 100 nt-5.04□□□□□ -3.22
TY1B-NL1Q12112 YLR294CYLR294C 330 nt-5.09□□□□□ -3.22
TY1B-NL1Q12112 YNL103W-AYNL103W-A 90 nt-5.28□□□□□ -3.25
TY1B-NL1Q12112 YLR466C-BYLR466C-B 117 nt-5.33□□□□□ -3.26
TY1B-NL1Q12112 YGL041C-BYGL041C-B 183 nt-5.34□□□□□ -3.26
TY1B-NL1Q12112 snR61snR61 90 nt-5.39□□□□□ -3.27
TY1B-NL1Q12112 tM(CAU)Q1tM(CAU)Q1 76 nt-5.5□□□□□ -3.29
TY1B-NL1Q12112 tR(ACG)Q2tR(ACG)Q2 74 nt-5.54□□□□□ -3.3
TY1B-NL1Q12112 YLR149C-AYLR149C-A 87 nt-5.54□□□□□ -3.3
TY1B-NL1Q12112 YNL338WYNL338W 159 nt-5.62□□□□□ -3.31
TY1B-NL1Q12112 snR53snR53 91 nt-5.67□□□□□ -3.32
TY1B-NL1Q12112 Q0032Q0032 291 nt-5.75□□□□□ -3.33
TY1B-NL1Q12112 Q0143Q0143 153 nt-5.95□□□□□ -3.36
TY1B-NL1Q12112 Q0144Q0144 330 nt-6.1□□□□□ -3.39
TY1B-NL1Q12112 YLL066W-BYLL066W-B 171 nt-6.26□□□□□ -3.41
TY1B-NL1Q12112 YMR326CYMR326C 309 nt-6.33□□□□□ -3.42
TY1B-NL1Q12112 YHR217CYHR217C 462 nt-6.57□□□□□ -3.46
TY1B-NL1Q12112 snR75snR75 89 nt-7.18□□□□□ -3.56
TY1B-NL1Q12112 ATP8Q0080 147 nt-7.21□□□□□ -3.56
TY1B-NL1Q12112 YDL247W-AYDL247W-A 75 nt-7.53□□□□□ -3.61
TY1B-NL1Q12112 YBL109WYBL109W 336 nt-7.62□□□□□ -3.63
TY1B-NL1Q12112 Q0092Q0092 141 nt-8.14□□□□□ -3.71
Retrieved 29 of 7,029 protein–RNA pairs in 6.3 ms