Protein–RNA interactions for Protein: Q12088

TY1B-LR1, Transposon Ty1-LR1 Gag-Pol polyprotein, yeastyeast

Known RBP Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-LR1Q12088 VAR1Q0140 1197 nt-4.84□□□□□ -3.18
TY1B-LR1Q12088 YOR225WYOR225W 330 nt-4.86□□□□□ -3.19
TY1B-LR1Q12088 snR40snR40 97 nt-4.91□□□□□ -3.19
TY1B-LR1Q12088 YCL001W-BYCL001W-B 255 nt-4.94□□□□□ -3.2
TY1B-LR1Q12088 YOR231C-AYOR231C-A 201 nt-4.98□□□□□ -3.21
TY1B-LR1Q12088 snR64snR64 101 nt-5□□□□□ -3.21
TY1B-LR1Q12088 snR62snR62 100 nt-5.05□□□□□ -3.22
TY1B-LR1Q12088 YMR046W-AYMR046W-A 129 nt-5.06□□□□□ -3.22
TY1B-LR1Q12088 YLR294CYLR294C 330 nt-5.09□□□□□ -3.22
TY1B-LR1Q12088 YNL103W-AYNL103W-A 90 nt-5.33□□□□□ -3.26
TY1B-LR1Q12088 YGL041C-BYGL041C-B 183 nt-5.34□□□□□ -3.26
TY1B-LR1Q12088 snR61snR61 90 nt-5.48□□□□□ -3.29
TY1B-LR1Q12088 YLR466C-BYLR466C-B 117 nt-5.49□□□□□ -3.29
TY1B-LR1Q12088 YLR149C-AYLR149C-A 87 nt-5.54□□□□□ -3.3
TY1B-LR1Q12088 tM(CAU)Q1tM(CAU)Q1 76 nt-5.67□□□□□ -3.32
TY1B-LR1Q12088 snR53snR53 91 nt-5.67□□□□□ -3.32
TY1B-LR1Q12088 tR(ACG)Q2tR(ACG)Q2 74 nt-5.75□□□□□ -3.33
TY1B-LR1Q12088 YNL338WYNL338W 159 nt-5.75□□□□□ -3.33
TY1B-LR1Q12088 Q0032Q0032 291 nt-5.88□□□□□ -3.35
TY1B-LR1Q12088 Q0143Q0143 153 nt-5.95□□□□□ -3.36
TY1B-LR1Q12088 YLL066W-BYLL066W-B 171 nt-6.26□□□□□ -3.41
TY1B-LR1Q12088 YMR326CYMR326C 309 nt-6.33□□□□□ -3.42
TY1B-LR1Q12088 Q0144Q0144 330 nt-6.38□□□□□ -3.43
TY1B-LR1Q12088 YHR217CYHR217C 462 nt-6.6□□□□□ -3.47
TY1B-LR1Q12088 snR75snR75 89 nt-7.18□□□□□ -3.56
TY1B-LR1Q12088 ATP8Q0080 147 nt-7.38□□□□□ -3.59
TY1B-LR1Q12088 YDL247W-AYDL247W-A 75 nt-7.53□□□□□ -3.61
TY1B-LR1Q12088 YBL109WYBL109W 336 nt-7.62□□□□□ -3.63
TY1B-LR1Q12088 Q0092Q0092 141 nt-8.32□□□□□ -3.74
Retrieved 29 of 7,029 protein–RNA pairs in 5.9 ms