Protein–RNA interactions for Protein: Q08438

VHS3, Phosphopantothenoylcysteine decarboxylase subunit VHS3, yeastyeast

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VHS3Q08438 tT(UGU)G2tT(UGU)G2 72 nt-0.51□□□□□ -2.49
VHS3Q08438 tT(UGU)PtT(UGU)P 72 nt-0.51□□□□□ -2.49
VHS3Q08438 snR33snR33 183 nt-0.53□□□□□ -2.49
VHS3Q08438 YDL114W-AYDL114W-A 114 nt-0.56□□□□□ -2.5
VHS3Q08438 YNR077CYNR077C 255 nt-0.57□□□□□ -2.5
VHS3Q08438 snR77snR77 88 nt-0.6□□□□□ -2.51
VHS3Q08438 tV(UAC)QtV(UAC)Q 76 nt-0.61□□□□□ -2.51
VHS3Q08438 YLR149C-AYLR149C-A 87 nt-0.65□□□□□ -2.51
VHS3Q08438 tP(UGG)QtP(UGG)Q 72 nt-0.73□□□□□ -2.53
VHS3Q08438 YBR223W-AYBR223W-A 120 nt-0.76□□□□□ -2.53
VHS3Q08438 CDC65tQ(CUG)M 72 nt-0.79□□□□□ -2.54
VHS3Q08438 YKL096C-BYKL096C-B 150 nt-0.9□□□□□ -2.55
VHS3Q08438 YMR315W-AYMR315W-A 108 nt-0.93□□□□□ -2.56
VHS3Q08438 snR6snR6 112 nt-0.99□□□□□ -2.57
VHS3Q08438 YOR335W-AYOR335W-A 81 nt-1.02□□□□□ -2.57
VHS3Q08438 tY(GUA)QtY(GUA)Q 84 nt-1.04□□□□□ -2.58
VHS3Q08438 RPL41BYDL133C-A 78 nt-1.18□□□□□ -2.6
VHS3Q08438 snR73snR73 106 nt-1.19□□□□□ -2.6
VHS3Q08438 YOR309CYOR309C 381 nt-1.21□□□□□ -2.6
VHS3Q08438 snR40snR40 97 nt-1.34□□□□□ -2.62
VHS3Q08438 snR75snR75 89 nt-1.39□□□□□ -2.63
VHS3Q08438 YBR126W-BYBR126W-B 144 nt-1.58□□□□□ -2.66
VHS3Q08438 YDR543CYDR543C 300 nt-1.66□□□□□ -2.68
VHS3Q08438 YOL166W-AYOL166W-A 156 nt-1.75□□□□□ -2.69
VHS3Q08438 snR58snR58 96 nt-1.81□□□□□ -2.7
VHS3Q08438 snR87snR87 109 nt-1.91□□□□□ -2.72
VHS3Q08438 tC(GCA)QtC(GCA)Q 76 nt-1.92□□□□□ -2.72
VHS3Q08438 YJR162CYJR162C 351 nt-2.59□□□□□ -2.82
VHS3Q08438 YJL136W-AYJL136W-A 84 nt-2.76□□□□□ -2.85
Retrieved 29 of 7,029 protein–RNA pairs in 2.6 ms