Protein–RNA interactions for Protein: Q05919

VPS38, Vacuolar protein sorting-associated protein 38, yeastyeast

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS38Q05919 YBL109WYBL109W 336 nt-1.32□□□□□ -2.62
VPS38Q05919 YMR315W-AYMR315W-A 108 nt-1.36□□□□□ -2.63
VPS38Q05919 YDL114W-AYDL114W-A 114 nt-1.4□□□□□ -2.63
VPS38Q05919 YLL066W-BYLL066W-B 171 nt-1.4□□□□□ -2.63
VPS38Q05919 YDL159W-AYDL159W-A 132 nt-1.44□□□□□ -2.64
VPS38Q05919 YGR122C-AYGR122C-A 129 nt-1.44□□□□□ -2.64
VPS38Q05919 YNR077CYNR077C 255 nt-1.44□□□□□ -2.64
VPS38Q05919 tV(UAC)QtV(UAC)Q 76 nt-1.48□□□□□ -2.65
VPS38Q05919 YDR524C-AYDR524C-A 120 nt-1.49□□□□□ -2.65
VPS38Q05919 tY(GUA)QtY(GUA)Q 84 nt-1.56□□□□□ -2.66
VPS38Q05919 YDL247W-AYDL247W-A 75 nt-1.58□□□□□ -2.66
VPS38Q05919 snR53snR53 91 nt-1.66□□□□□ -2.68
VPS38Q05919 snR6snR6 112 nt-1.69□□□□□ -2.68
VPS38Q05919 RPL41BYDL133C-A 78 nt-1.73□□□□□ -2.69
VPS38Q05919 YOR309CYOR309C 381 nt-1.76□□□□□ -2.69
VPS38Q05919 YOR335W-AYOR335W-A 81 nt-1.76□□□□□ -2.69
VPS38Q05919 snR73snR73 106 nt-1.89□□□□□ -2.71
VPS38Q05919 YLR149C-AYLR149C-A 87 nt-1.95□□□□□ -2.72
VPS38Q05919 YBR126W-BYBR126W-B 144 nt-2.11□□□□□ -2.75
VPS38Q05919 YKL096C-BYKL096C-B 150 nt-2.15□□□□□ -2.75
VPS38Q05919 snR40snR40 97 nt-2.43□□□□□ -2.8
VPS38Q05919 snR58snR58 96 nt-2.52□□□□□ -2.81
VPS38Q05919 snR87snR87 109 nt-2.72□□□□□ -2.84
VPS38Q05919 tC(GCA)QtC(GCA)Q 76 nt-2.79□□□□□ -2.86
VPS38Q05919 YDR543CYDR543C 300 nt-2.85□□□□□ -2.87
VPS38Q05919 snR75snR75 89 nt-2.95□□□□□ -2.88
VPS38Q05919 YOL166W-AYOL166W-A 156 nt-3.39□□□□□ -2.95
VPS38Q05919 YJR162CYJR162C 351 nt-3.8□□□□□ -3.02
VPS38Q05919 YJL136W-AYJL136W-A 84 nt-4.35□□□□□ -3.11
Retrieved 29 of 7,029 protein–RNA pairs in 5.8 ms