Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SgcaP82350 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC14.43□□□□□ -0.1
SgcaP82350 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC14.43□□□□□ -0.1
SgcaP82350 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SgcaP82350 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SgcaP82350 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SgcaP82350 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
SgcaP82350 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SgcaP82350 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
SgcaP82350 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
SgcaP82350 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SgcaP82350 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SgcaP82350 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SgcaP82350 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SgcaP82350 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SgcaP82350 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SgcaP82350 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SgcaP82350 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SgcaP82350 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SgcaP82350 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SgcaP82350 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SgcaP82350 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SgcaP82350 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
SgcaP82350 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC14.42□□□□□ -0.1
SgcaP82350 Gm27454-201ENSMUST00000185090 204 ntBASIC14.42□□□□□ -0.1
SgcaP82350 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SgcaP82350 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC14.42□□□□□ -0.1
SgcaP82350 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SgcaP82350 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SgcaP82350 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SgcaP82350 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SgcaP82350 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC14.42□□□□□ -0.1
SgcaP82350 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SgcaP82350 Gm9867-201ENSMUST00000192212 2647 ntBASIC14.42□□□□□ -0.1
SgcaP82350 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SgcaP82350 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SgcaP82350 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SgcaP82350 Gm16401-202ENSMUST00000197463 2074 ntBASIC14.42□□□□□ -0.1
SgcaP82350 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
SgcaP82350 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SgcaP82350 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SgcaP82350 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SgcaP82350 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC14.41□□□□□ -0.1
SgcaP82350 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SgcaP82350 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC14.41□□□□□ -0.1
SgcaP82350 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.41□□□□□ -0.1
SgcaP82350 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SgcaP82350 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SgcaP82350 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SgcaP82350 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SgcaP82350 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC14.41□□□□□ -0.1
SgcaP82350 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC14.41□□□□□ -0.1
SgcaP82350 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
SgcaP82350 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SgcaP82350 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SgcaP82350 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SgcaP82350 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SgcaP82350 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.41□□□□□ -0.1
SgcaP82350 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SgcaP82350 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
SgcaP82350 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SgcaP82350 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC14.41□□□□□ -0.1
SgcaP82350 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SgcaP82350 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SgcaP82350 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SgcaP82350 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SgcaP82350 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SgcaP82350 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SgcaP82350 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SgcaP82350 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SgcaP82350 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SgcaP82350 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
SgcaP82350 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SgcaP82350 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SgcaP82350 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
SgcaP82350 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SgcaP82350 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SgcaP82350 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SgcaP82350 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SgcaP82350 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SgcaP82350 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
SgcaP82350 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SgcaP82350 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC14.4□□□□□ -0.1
SgcaP82350 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SgcaP82350 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SgcaP82350 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SgcaP82350 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SgcaP82350 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SgcaP82350 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SgcaP82350 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SgcaP82350 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SgcaP82350 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SgcaP82350 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SgcaP82350 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
SgcaP82350 Gm13146-201ENSMUST00000118508 780 ntBASIC14.39□□□□□ -0.11
SgcaP82350 Gm13534-201ENSMUST00000121169 513 ntBASIC14.39□□□□□ -0.11
SgcaP82350 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC14.39□□□□□ -0.11
SgcaP82350 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SgcaP82350 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC14.39□□□□□ -0.11
SgcaP82350 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms