Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 AC140930.3-201ENSMUST00000222935 274 ntBASIC14.38□□□□□ -0.11
Lsm5P62322 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lsm5P62322 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lsm5P62322 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Lsm5P62322 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lsm5P62322 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lsm5P62322 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lsm5P62322 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Lsm5P62322 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Lsm5P62322 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm5P62322 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Lsm5P62322 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm5P62322 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm5P62322 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm5P62322 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm5P62322 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm5P62322 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC14.37□□□□□ -0.11
Lsm5P62322 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm5P62322 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC14.37□□□□□ -0.11
Lsm5P62322 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm5P62322 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm5P62322 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm5P62322 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC14.37□□□□□ -0.11
Lsm5P62322 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm5P62322 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm5P62322 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm5P62322 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm5P62322 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm5P62322 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Lsm5P62322 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Lsm5P62322 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm5P62322 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm5P62322 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm5P62322 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Lsm5P62322 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm5P62322 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC14.36□□□□□ -0.11
Lsm5P62322 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm5P62322 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm5P62322 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm5P62322 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm5P62322 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm5P62322 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm5P62322 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm5P62322 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm5P62322 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm5P62322 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Lsm5P62322 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm5P62322 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm5P62322 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm5P62322 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm5P62322 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm5P62322 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Lsm5P62322 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm5P62322 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Lsm5P62322 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm5P62322 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm5P62322 AC125311.2-201ENSMUST00000227477 1940 ntBASIC14.35□□□□□ -0.11
Lsm5P62322 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm5P62322 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm5P62322 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Lsm5P62322 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm5P62322 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm5P62322 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm5P62322 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm5P62322 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm5P62322 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC14.35□□□□□ -0.11
Lsm5P62322 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC14.35□□□□□ -0.11
Lsm5P62322 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Lsm5P62322 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm5P62322 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm5P62322 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Lsm5P62322 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm5P62322 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm5P62322 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm5P62322 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm5P62322 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm5P62322 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm5P62322 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Lsm5P62322 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm5P62322 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm5P62322 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm5P62322 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm5P62322 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lsm5P62322 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lsm5P62322 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lsm5P62322 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lsm5P62322 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lsm5P62322 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lsm5P62322 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lsm5P62322 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lsm5P62322 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lsm5P62322 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lsm5P62322 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lsm5P62322 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Lsm5P62322 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lsm5P62322 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC14.34□□□□□ -0.11
Lsm5P62322 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Lsm5P62322 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lsm5P62322 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lsm5P62322 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms