Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Tubgcp3P58854 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tubgcp3P58854 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tubgcp3P58854 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Tubgcp3P58854 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tubgcp3P58854 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.54■□□□□ 0.4
Tubgcp3P58854 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Tubgcp3P58854 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Tubgcp3P58854 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tubgcp3P58854 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tubgcp3P58854 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tubgcp3P58854 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Tubgcp3P58854 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tubgcp3P58854 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.54■□□□□ 0.4
Tubgcp3P58854 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tubgcp3P58854 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tubgcp3P58854 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tubgcp3P58854 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Tubgcp3P58854 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tubgcp3P58854 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Tubgcp3P58854 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Tubgcp3P58854 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tubgcp3P58854 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.53■□□□□ 0.4
Tubgcp3P58854 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tubgcp3P58854 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Tubgcp3P58854 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Tubgcp3P58854 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Tubgcp3P58854 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tubgcp3P58854 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tubgcp3P58854 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Tubgcp3P58854 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Tubgcp3P58854 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.53■□□□□ 0.4
Tubgcp3P58854 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.53■□□□□ 0.4
Tubgcp3P58854 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Tubgcp3P58854 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Tubgcp3P58854 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Tubgcp3P58854 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
Tubgcp3P58854 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tubgcp3P58854 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.53■□□□□ 0.4
Tubgcp3P58854 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tubgcp3P58854 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
Tubgcp3P58854 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tubgcp3P58854 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tubgcp3P58854 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tubgcp3P58854 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.52■□□□□ 0.4
Tubgcp3P58854 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Tubgcp3P58854 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tubgcp3P58854 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tubgcp3P58854 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Tubgcp3P58854 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Tubgcp3P58854 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Tubgcp3P58854 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.52■□□□□ 0.39
Tubgcp3P58854 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Tubgcp3P58854 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Tubgcp3P58854 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tubgcp3P58854 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Tubgcp3P58854 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tubgcp3P58854 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Tubgcp3P58854 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Tubgcp3P58854 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Tubgcp3P58854 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Tubgcp3P58854 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.51■□□□□ 0.39
Tubgcp3P58854 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tubgcp3P58854 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tubgcp3P58854 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.51■□□□□ 0.39
Tubgcp3P58854 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tubgcp3P58854 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tubgcp3P58854 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Tubgcp3P58854 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Tubgcp3P58854 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.5■□□□□ 0.39
Tubgcp3P58854 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tubgcp3P58854 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
Tubgcp3P58854 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tubgcp3P58854 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Tubgcp3P58854 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tubgcp3P58854 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tubgcp3P58854 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Tubgcp3P58854 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
Tubgcp3P58854 Gm13168-201ENSMUST00000121771 632 ntBASIC17.5■□□□□ 0.39
Tubgcp3P58854 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.5■□□□□ 0.39
Tubgcp3P58854 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.5■□□□□ 0.39
Tubgcp3P58854 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.5■□□□□ 0.39
Tubgcp3P58854 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.5■□□□□ 0.39
Tubgcp3P58854 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tubgcp3P58854 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tubgcp3P58854 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Tubgcp3P58854 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tubgcp3P58854 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tubgcp3P58854 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Tubgcp3P58854 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tubgcp3P58854 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tubgcp3P58854 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tubgcp3P58854 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tubgcp3P58854 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tubgcp3P58854 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.49■□□□□ 0.39
Tubgcp3P58854 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tubgcp3P58854 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Tubgcp3P58854 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tubgcp3P58854 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tubgcp3P58854 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms