Protein–RNA interactions for Protein: P57743

LSM3, U6 snRNA-associated Sm-like protein LSm3, yeast

Known RBP Predictions only

Length 89 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
LSM3	P57743	YDL159W-A	YDL159W-A	132 nt		-4.19	□□□□□ -3.08
LSM3	P57743	YGL007C-A	YGL007C-A	87 nt		-4.2	□□□□□ -3.08
LSM3	P57743	YGL041C-B	YGL041C-B	183 nt		-4.23	□□□□□ -3.09
LSM3	P57743	snR87	snR87	109 nt		-4.29	□□□□□ -3.1
LSM3	P57743	YKL096C-B	YKL096C-B	150 nt		-4.31	□□□□□ -3.1
LSM3	P57743	snR62	snR62	100 nt		-4.35	□□□□□ -3.11
LSM3	P57743	snR61	snR61	90 nt		-4.39	□□□□□ -3.11
LSM3	P57743	YNL103W-A	YNL103W-A	90 nt		-4.42	□□□□□ -3.12
LSM3	P57743	snR64	snR64	101 nt		-4.43	□□□□□ -3.12
LSM3	P57743	YJR162C	YJR162C	351 nt		-4.48	□□□□□ -3.13
LSM3	P57743	snR58	snR58	96 nt		-4.5	□□□□□ -3.13
LSM3	P57743	YNL170W	YNL170W	396 nt		-4.51	□□□□□ -3.13
LSM3	P57743	YLR294C	YLR294C	330 nt		-4.71	□□□□□ -3.16
LSM3	P57743	Q0032	Q0032	291 nt		-4.74	□□□□□ -3.17
LSM3	P57743	YOR225W	YOR225W	330 nt		-4.79	□□□□□ -3.18
LSM3	P57743	tC(GCA)Q	tC(GCA)Q	76 nt		-5.16	□□□□□ -3.24
LSM3	P57743	snR53	snR53	91 nt		-5.21	□□□□□ -3.24
LSM3	P57743	snR40	snR40	97 nt		-5.23	□□□□□ -3.25
LSM3	P57743	YLR149C-A	YLR149C-A	87 nt		-5.26	□□□□□ -3.25
LSM3	P57743	YLL066W-B	YLL066W-B	171 nt		-5.41	□□□□□ -3.28
LSM3	P57743	YJL136W-A	YJL136W-A	84 nt		-5.42	□□□□□ -3.28
LSM3	P57743	YMR326C	YMR326C	309 nt		-5.54	□□□□□ -3.3
LSM3	P57743	YHR217C	YHR217C	462 nt		-5.57	□□□□□ -3.3
LSM3	P57743	ATP8	Q0080	147 nt		-5.77	□□□□□ -3.33
LSM3	P57743	Q0143	Q0143	153 nt		-5.81	□□□□□ -3.34
LSM3	P57743	YBL109W	YBL109W	336 nt		-6.3	□□□□□ -3.42
LSM3	P57743	YDL247W-A	YDL247W-A	75 nt		-6.5	□□□□□ -3.45
LSM3	P57743	Q0092	Q0092	141 nt		-6.61	□□□□□ -3.47
LSM3	P57743	snR75	snR75	89 nt		-7.12	□□□□□ -3.55

Retrieved 29 of 7,029 protein–RNA pairs in 56.3 ms