Protein–RNA interactions for Protein: P53969

SAM50, Sorting assembly machinery 50 kDa subunit, yeastyeast

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SAM50P53969 YNR077CYNR077C 255 nt-0.66□□□□□ -2.52
SAM50P53969 YDL159W-AYDL159W-A 132 nt-0.71□□□□□ -2.52
SAM50P53969 YGR122C-AYGR122C-A 129 nt-0.75□□□□□ -2.53
SAM50P53969 tP(UGG)QtP(UGG)Q 72 nt-0.78□□□□□ -2.53
SAM50P53969 snR77snR77 88 nt-0.8□□□□□ -2.54
SAM50P53969 snR53snR53 91 nt-0.8□□□□□ -2.54
SAM50P53969 YDL114W-AYDL114W-A 114 nt-0.82□□□□□ -2.54
SAM50P53969 YBR223W-AYBR223W-A 120 nt-0.83□□□□□ -2.54
SAM50P53969 CDC65tQ(CUG)M 72 nt-0.88□□□□□ -2.55
SAM50P53969 tV(UAC)QtV(UAC)Q 76 nt-0.88□□□□□ -2.55
SAM50P53969 YMR315W-AYMR315W-A 108 nt-1.01□□□□□ -2.57
SAM50P53969 YLR149C-AYLR149C-A 87 nt-1.08□□□□□ -2.58
SAM50P53969 snR6snR6 112 nt-1.2□□□□□ -2.6
SAM50P53969 tY(GUA)QtY(GUA)Q 84 nt-1.21□□□□□ -2.6
SAM50P53969 YOR335W-AYOR335W-A 81 nt-1.22□□□□□ -2.6
SAM50P53969 RPL41BYDL133C-A 78 nt-1.27□□□□□ -2.61
SAM50P53969 YOR309CYOR309C 381 nt-1.33□□□□□ -2.62
SAM50P53969 snR73snR73 106 nt-1.37□□□□□ -2.63
SAM50P53969 YKL096C-BYKL096C-B 150 nt-1.38□□□□□ -2.63
SAM50P53969 snR40snR40 97 nt-1.61□□□□□ -2.67
SAM50P53969 YBR126W-BYBR126W-B 144 nt-1.79□□□□□ -2.7
SAM50P53969 snR75snR75 89 nt-1.84□□□□□ -2.7
SAM50P53969 YOL166W-AYOL166W-A 156 nt-1.84□□□□□ -2.7
SAM50P53969 YDR543CYDR543C 300 nt-1.86□□□□□ -2.71
SAM50P53969 snR58snR58 96 nt-1.92□□□□□ -2.72
SAM50P53969 tC(GCA)QtC(GCA)Q 76 nt-2.06□□□□□ -2.74
SAM50P53969 snR87snR87 109 nt-2.08□□□□□ -2.74
SAM50P53969 YJR162CYJR162C 351 nt-2.89□□□□□ -2.87
SAM50P53969 YJL136W-AYJL136W-A 84 nt-3.25□□□□□ -2.93
Retrieved 29 of 7,029 protein–RNA pairs in 3.7 ms