Protein–RNA interactions for Protein: P53960

YNL040W, Putative alanyl-tRNA editing protein alaX, yeastyeast

Predicted RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YNL040WP53960 YBR126W-BYBR126W-B 144 nt-1.24□□□□□ -2.61
YNL040WP53960 YDL114W-AYDL114W-A 114 nt-1.28□□□□□ -2.61
YNL040WP53960 tV(UAC)QtV(UAC)Q 76 nt-1.29□□□□□ -2.62
YNL040WP53960 Q0143Q0143 153 nt-1.3□□□□□ -2.62
YNL040WP53960 snR73snR73 106 nt-1.31□□□□□ -2.62
YNL040WP53960 Q0092Q0092 141 nt-1.31□□□□□ -2.62
YNL040WP53960 snR64snR64 101 nt-1.34□□□□□ -2.62
YNL040WP53960 YDL159W-AYDL159W-A 132 nt-1.35□□□□□ -2.63
YNL040WP53960 YGR122C-AYGR122C-A 129 nt-1.37□□□□□ -2.63
YNL040WP53960 YMR326CYMR326C 309 nt-1.37□□□□□ -2.63
YNL040WP53960 snR85snR85 171 nt-1.42□□□□□ -2.64
YNL040WP53960 YHR217CYHR217C 462 nt-1.42□□□□□ -2.64
YNL040WP53960 RPL41BYDL133C-A 78 nt-1.43□□□□□ -2.64
YNL040WP53960 YLL066W-BYLL066W-B 171 nt-1.52□□□□□ -2.65
YNL040WP53960 YBL109WYBL109W 336 nt-1.61□□□□□ -2.67
YNL040WP53960 snR53snR53 91 nt-1.63□□□□□ -2.67
YNL040WP53960 YDR524C-AYDR524C-A 120 nt-1.64□□□□□ -2.67
YNL040WP53960 YDR543CYDR543C 300 nt-1.71□□□□□ -2.68
YNL040WP53960 snR87snR87 109 nt-1.74□□□□□ -2.69
YNL040WP53960 YKL096C-BYKL096C-B 150 nt-1.74□□□□□ -2.69
YNL040WP53960 YLR149C-AYLR149C-A 87 nt-1.77□□□□□ -2.69
YNL040WP53960 YDL247W-AYDL247W-A 75 nt-1.8□□□□□ -2.7
YNL040WP53960 snR58snR58 96 nt-2□□□□□ -2.73
YNL040WP53960 snR40snR40 97 nt-2.05□□□□□ -2.74
YNL040WP53960 YOL166W-AYOL166W-A 156 nt-2.18□□□□□ -2.76
YNL040WP53960 tC(GCA)QtC(GCA)Q 76 nt-2.24□□□□□ -2.77
YNL040WP53960 YJR162CYJR162C 351 nt-2.26□□□□□ -2.77
YNL040WP53960 YJL136W-AYJL136W-A 84 nt-2.35□□□□□ -2.79
YNL040WP53960 snR75snR75 89 nt-2.61□□□□□ -2.83
Retrieved 29 of 7,029 protein–RNA pairs in 2.8 ms