Protein–RNA interactions for Protein: P53843

IST1, Vacuolar protein sorting-associated protein IST1, yeastyeast

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
IST1P53843 snR77snR77 88 nt-0.95□□□□□ -2.56
IST1P53843 YDL159W-AYDL159W-A 132 nt-0.95□□□□□ -2.56
IST1P53843 YGR122C-AYGR122C-A 129 nt-1.03□□□□□ -2.57
IST1P53843 CDC65tQ(CUG)M 72 nt-1.04□□□□□ -2.58
IST1P53843 tP(UGG)QtP(UGG)Q 72 nt-1.05□□□□□ -2.58
IST1P53843 YDL114W-AYDL114W-A 114 nt-1.08□□□□□ -2.58
IST1P53843 tV(UAC)QtV(UAC)Q 76 nt-1.1□□□□□ -2.59
IST1P53843 YNR077CYNR077C 255 nt-1.14□□□□□ -2.59
IST1P53843 snR53snR53 91 nt-1.14□□□□□ -2.59
IST1P53843 YBR223W-AYBR223W-A 120 nt-1.17□□□□□ -2.6
IST1P53843 YMR315W-AYMR315W-A 108 nt-1.21□□□□□ -2.6
IST1P53843 snR6snR6 112 nt-1.4□□□□□ -2.63
IST1P53843 YLR149C-AYLR149C-A 87 nt-1.42□□□□□ -2.64
IST1P53843 YOR335W-AYOR335W-A 81 nt-1.46□□□□□ -2.64
IST1P53843 YOR309CYOR309C 381 nt-1.55□□□□□ -2.66
IST1P53843 RPL41BYDL133C-A 78 nt-1.57□□□□□ -2.66
IST1P53843 tY(GUA)QtY(GUA)Q 84 nt-1.57□□□□□ -2.66
IST1P53843 snR73snR73 106 nt-1.61□□□□□ -2.67
IST1P53843 YKL096C-BYKL096C-B 150 nt-1.82□□□□□ -2.7
IST1P53843 snR40snR40 97 nt-2□□□□□ -2.73
IST1P53843 snR58snR58 96 nt-2.3□□□□□ -2.78
IST1P53843 YBR126W-BYBR126W-B 144 nt-2.31□□□□□ -2.78
IST1P53843 snR75snR75 89 nt-2.37□□□□□ -2.79
IST1P53843 snR87snR87 109 nt-2.42□□□□□ -2.8
IST1P53843 tC(GCA)QtC(GCA)Q 76 nt-2.5□□□□□ -2.81
IST1P53843 YDR543CYDR543C 300 nt-2.64□□□□□ -2.83
IST1P53843 YOL166W-AYOL166W-A 156 nt-2.81□□□□□ -2.86
IST1P53843 YJR162CYJR162C 351 nt-3.95□□□□□ -3.04
IST1P53843 YJL136W-AYJL136W-A 84 nt-4.16□□□□□ -3.08
Retrieved 29 of 7,029 protein–RNA pairs in 48 ms