Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SftpbP50405 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SftpbP50405 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SftpbP50405 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SftpbP50405 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SftpbP50405 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SftpbP50405 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SftpbP50405 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SftpbP50405 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.58■□□□□ 0.4
SftpbP50405 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SftpbP50405 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.57■□□□□ 0.4
SftpbP50405 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
SftpbP50405 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SftpbP50405 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SftpbP50405 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SftpbP50405 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SftpbP50405 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.57■□□□□ 0.4
SftpbP50405 Gm10138-203ENSMUST00000206952 366 ntBASIC17.57■□□□□ 0.4
SftpbP50405 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SftpbP50405 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SftpbP50405 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SftpbP50405 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SftpbP50405 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.57■□□□□ 0.4
SftpbP50405 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SftpbP50405 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SftpbP50405 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SftpbP50405 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SftpbP50405 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SftpbP50405 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SftpbP50405 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SftpbP50405 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SftpbP50405 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SftpbP50405 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SftpbP50405 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SftpbP50405 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SftpbP50405 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SftpbP50405 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.56■□□□□ 0.4
SftpbP50405 Mir6349-201ENSMUST00000184059 97 ntBASIC17.56■□□□□ 0.4
SftpbP50405 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SftpbP50405 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SftpbP50405 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SftpbP50405 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SftpbP50405 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SftpbP50405 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SftpbP50405 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SftpbP50405 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SftpbP50405 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
SftpbP50405 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SftpbP50405 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SftpbP50405 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SftpbP50405 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
SftpbP50405 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
SftpbP50405 Gm12896-201ENSMUST00000118430 226 ntBASIC17.55■□□□□ 0.4
SftpbP50405 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SftpbP50405 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.55■□□□□ 0.4
SftpbP50405 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.55■□□□□ 0.4
SftpbP50405 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
SftpbP50405 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SftpbP50405 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SftpbP50405 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
SftpbP50405 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SftpbP50405 Dio3-201ENSMUST00000097228 1449 ntBASIC17.55■□□□□ 0.4
SftpbP50405 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SftpbP50405 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SftpbP50405 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SftpbP50405 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.54■□□□□ 0.4
SftpbP50405 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
SftpbP50405 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.54■□□□□ 0.4
SftpbP50405 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
SftpbP50405 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SftpbP50405 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SftpbP50405 Gm15375-201ENSMUST00000119510 849 ntBASIC17.54■□□□□ 0.4
SftpbP50405 Gm11643-201ENSMUST00000119578 864 ntBASIC17.54■□□□□ 0.4
SftpbP50405 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.54■□□□□ 0.4
SftpbP50405 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.54■□□□□ 0.4
SftpbP50405 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SftpbP50405 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SftpbP50405 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SftpbP50405 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SftpbP50405 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.54■□□□□ 0.4
SftpbP50405 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SftpbP50405 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SftpbP50405 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SftpbP50405 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SftpbP50405 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SftpbP50405 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SftpbP50405 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SftpbP50405 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SftpbP50405 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SftpbP50405 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
SftpbP50405 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SftpbP50405 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SftpbP50405 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
SftpbP50405 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.53■□□□□ 0.4
SftpbP50405 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SftpbP50405 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SftpbP50405 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SftpbP50405 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.53■□□□□ 0.4
SftpbP50405 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SftpbP50405 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms