Protein–RNA interactions for Protein: P48836

VMA10, V-type proton ATPase subunit G, yeast

Known RBP Predictions only

Length 114 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA10	P48836	tM(CAU)Q1	tM(CAU)Q1	76 nt		-3.68	□□□□□ -3
VMA10	P48836	YGL007C-A	YGL007C-A	87 nt		-3.73	□□□□□ -3.01
VMA10	P48836	YKL096C-B	YKL096C-B	150 nt		-3.74	□□□□□ -3.01
VMA10	P48836	YNL103W-A	YNL103W-A	90 nt		-3.79	□□□□□ -3.02
VMA10	P48836	snR62	snR62	100 nt		-3.83	□□□□□ -3.02
VMA10	P48836	snR64	snR64	101 nt		-3.87	□□□□□ -3.03
VMA10	P48836	snR61	snR61	90 nt		-3.89	□□□□□ -3.03
VMA10	P48836	YNL170W	YNL170W	396 nt		-3.92	□□□□□ -3.04
VMA10	P48836	snR58	snR58	96 nt		-4.05	□□□□□ -3.06
VMA10	P48836	YLR294C	YLR294C	330 nt		-4.09	□□□□□ -3.06
VMA10	P48836	Q0142	Q0142	177 nt		-4.18	□□□□□ -3.08
VMA10	P48836	Q0032	Q0032	291 nt		-4.19	□□□□□ -3.08
VMA10	P48836	YOR225W	YOR225W	330 nt		-4.23	□□□□□ -3.09
VMA10	P48836	snR40	snR40	97 nt		-4.52	□□□□□ -3.13
VMA10	P48836	tC(GCA)Q	tC(GCA)Q	76 nt		-4.55	□□□□□ -3.14
VMA10	P48836	YOL166W-A	YOL166W-A	156 nt		-4.56	□□□□□ -3.14
VMA10	P48836	YLR149C-A	YLR149C-A	87 nt		-4.57	□□□□□ -3.14
VMA10	P48836	snR53	snR53	91 nt		-4.61	□□□□□ -3.15
VMA10	P48836	YJR162C	YJR162C	351 nt		-4.67	□□□□□ -3.16
VMA10	P48836	YLL066W-B	YLL066W-B	171 nt		-4.69	□□□□□ -3.16
VMA10	P48836	YJL136W-A	YJL136W-A	84 nt		-4.9	□□□□□ -3.19
VMA10	P48836	YHR217C	YHR217C	462 nt		-4.92	□□□□□ -3.2
VMA10	P48836	YMR326C	YMR326C	309 nt		-4.96	□□□□□ -3.2
VMA10	P48836	ATP8	Q0080	147 nt		-5.07	□□□□□ -3.22
VMA10	P48836	Q0143	Q0143	153 nt		-5.09	□□□□□ -3.22
VMA10	P48836	YBL109W	YBL109W	336 nt		-5.38	□□□□□ -3.27
VMA10	P48836	YDL247W-A	YDL247W-A	75 nt		-5.76	□□□□□ -3.33
VMA10	P48836	Q0092	Q0092	141 nt		-5.8	□□□□□ -3.34
VMA10	P48836	snR75	snR75	89 nt		-6.22	□□□□□ -3.41

Retrieved 29 of 7,029 protein–RNA pairs in 6.1 ms