Protein–RNA interactions for Protein: P48743

RFX1, RFX-like DNA-binding protein RFX1, yeastyeast

Predictions only

Length 811 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RFX1P48743 snR77snR77 88 nt-0.41□□□□□ -2.48
RFX1P48743 tV(UAC)QtV(UAC)Q 76 nt-0.41□□□□□ -2.48
RFX1P48743 YHL009W-BYHL009W-B 5409 nt-0.48□□□□□ -2.49
RFX1P48743 YNR077CYNR077C 255 nt-0.52□□□□□ -2.49
RFX1P48743 snR33snR33 183 nt-0.52□□□□□ -2.49
RFX1P48743 YKL096C-BYKL096C-B 150 nt-0.53□□□□□ -2.49
RFX1P48743 tT(UGU)G1tT(UGU)G1 72 nt-0.55□□□□□ -2.5
RFX1P48743 tT(UGU)G2tT(UGU)G2 72 nt-0.55□□□□□ -2.5
RFX1P48743 tT(UGU)PtT(UGU)P 72 nt-0.55□□□□□ -2.5
RFX1P48743 YBR223W-AYBR223W-A 120 nt-0.68□□□□□ -2.52
RFX1P48743 tP(UGG)QtP(UGG)Q 72 nt-0.73□□□□□ -2.53
RFX1P48743 CDC65tQ(CUG)M 72 nt-0.75□□□□□ -2.53
RFX1P48743 YMR315W-AYMR315W-A 108 nt-0.88□□□□□ -2.55
RFX1P48743 snR75snR75 89 nt-0.92□□□□□ -2.56
RFX1P48743 RPL41BYDL133C-A 78 nt-0.92□□□□□ -2.56
RFX1P48743 snR6snR6 112 nt-0.94□□□□□ -2.56
RFX1P48743 YOR335W-AYOR335W-A 81 nt-0.98□□□□□ -2.57
RFX1P48743 tY(GUA)QtY(GUA)Q 84 nt-0.99□□□□□ -2.57
RFX1P48743 snR40snR40 97 nt-1.03□□□□□ -2.57
RFX1P48743 snR73snR73 106 nt-1.14□□□□□ -2.59
RFX1P48743 YOR309CYOR309C 381 nt-1.17□□□□□ -2.6
RFX1P48743 YOL166W-AYOL166W-A 156 nt-1.44□□□□□ -2.64
RFX1P48743 YBR126W-BYBR126W-B 144 nt-1.44□□□□□ -2.64
RFX1P48743 snR58snR58 96 nt-1.48□□□□□ -2.65
RFX1P48743 YDR543CYDR543C 300 nt-1.57□□□□□ -2.66
RFX1P48743 tC(GCA)QtC(GCA)Q 76 nt-1.6□□□□□ -2.67
RFX1P48743 snR87snR87 109 nt-1.87□□□□□ -2.71
RFX1P48743 YJR162CYJR162C 351 nt-2.45□□□□□ -2.8
RFX1P48743 YJL136W-AYJL136W-A 84 nt-2.72□□□□□ -2.84
Retrieved 29 of 7,029 protein–RNA pairs in 25.2 ms