Protein–RNA interactions for Protein: P47821

SSN8, RNA polymerase II holoenzyme cyclin-like subunit, yeastyeast

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSN8P47821 YLL066W-BYLL066W-B 171 nt-1.02□□□□□ -2.57
SSN8P47821 snR64snR64 101 nt-1.04□□□□□ -2.58
SSN8P47821 YDR524C-AYDR524C-A 120 nt-1.07□□□□□ -2.58
SSN8P47821 tV(UAC)QtV(UAC)Q 76 nt-1.15□□□□□ -2.59
SSN8P47821 YGR122C-AYGR122C-A 129 nt-1.16□□□□□ -2.6
SSN8P47821 YMR315W-AYMR315W-A 108 nt-1.17□□□□□ -2.6
SSN8P47821 YDL114W-AYDL114W-A 114 nt-1.18□□□□□ -2.6
SSN8P47821 YBR223W-AYBR223W-A 120 nt-1.23□□□□□ -2.61
SSN8P47821 YDL247W-AYDL247W-A 75 nt-1.29□□□□□ -2.62
SSN8P47821 snR6snR6 112 nt-1.34□□□□□ -2.62
SSN8P47821 snR53snR53 91 nt-1.34□□□□□ -2.62
SSN8P47821 tY(GUA)QtY(GUA)Q 84 nt-1.43□□□□□ -2.64
SSN8P47821 YOR335W-AYOR335W-A 81 nt-1.43□□□□□ -2.64
SSN8P47821 YOR309CYOR309C 381 nt-1.45□□□□□ -2.64
SSN8P47821 YNR077CYNR077C 255 nt-1.49□□□□□ -2.65
SSN8P47821 YLR149C-AYLR149C-A 87 nt-1.53□□□□□ -2.65
SSN8P47821 snR73snR73 106 nt-1.56□□□□□ -2.66
SSN8P47821 RPL41BYDL133C-A 78 nt-1.61□□□□□ -2.67
SSN8P47821 YKL096C-BYKL096C-B 150 nt-1.84□□□□□ -2.7
SSN8P47821 YBR126W-BYBR126W-B 144 nt-2.03□□□□□ -2.73
SSN8P47821 snR40snR40 97 nt-2.04□□□□□ -2.74
SSN8P47821 snR58snR58 96 nt-2.31□□□□□ -2.78
SSN8P47821 snR87snR87 109 nt-2.31□□□□□ -2.78
SSN8P47821 tC(GCA)QtC(GCA)Q 76 nt-2.51□□□□□ -2.81
SSN8P47821 snR75snR75 89 nt-2.52□□□□□ -2.81
SSN8P47821 YDR543CYDR543C 300 nt-2.86□□□□□ -2.87
SSN8P47821 YOL166W-AYOL166W-A 156 nt-3.2□□□□□ -2.92
SSN8P47821 YJR162CYJR162C 351 nt-3.78□□□□□ -3.01
SSN8P47821 YJL136W-AYJL136W-A 84 nt-3.9□□□□□ -3.03
Retrieved 29 of 7,029 protein–RNA pairs in 193.9 ms