Protein–RNA interactions for Protein: P47095

MDE1, Methylthioribulose-1-phosphate dehydratase, yeastyeast

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MDE1P47095 CDC65tQ(CUG)M 72 nt-0.97□□□□□ -2.56
MDE1P47095 snR64snR64 101 nt-1.01□□□□□ -2.57
MDE1P47095 YLL066W-BYLL066W-B 171 nt-1.02□□□□□ -2.57
MDE1P47095 YDL159W-AYDL159W-A 132 nt-1.06□□□□□ -2.58
MDE1P47095 YDR524C-AYDR524C-A 120 nt-1.06□□□□□ -2.58
MDE1P47095 YGR122C-AYGR122C-A 129 nt-1.11□□□□□ -2.59
MDE1P47095 YDL114W-AYDL114W-A 114 nt-1.12□□□□□ -2.59
MDE1P47095 YMR315W-AYMR315W-A 108 nt-1.12□□□□□ -2.59
MDE1P47095 tV(UAC)QtV(UAC)Q 76 nt-1.15□□□□□ -2.59
MDE1P47095 YDL247W-AYDL247W-A 75 nt-1.2□□□□□ -2.6
MDE1P47095 snR53snR53 91 nt-1.29□□□□□ -2.62
MDE1P47095 snR6snR6 112 nt-1.35□□□□□ -2.63
MDE1P47095 tY(GUA)QtY(GUA)Q 84 nt-1.39□□□□□ -2.63
MDE1P47095 YOR335W-AYOR335W-A 81 nt-1.4□□□□□ -2.63
MDE1P47095 YOR309CYOR309C 381 nt-1.42□□□□□ -2.64
MDE1P47095 RPL41BYDL133C-A 78 nt-1.48□□□□□ -2.65
MDE1P47095 YLR149C-AYLR149C-A 87 nt-1.51□□□□□ -2.65
MDE1P47095 snR73snR73 106 nt-1.53□□□□□ -2.65
MDE1P47095 YBR126W-BYBR126W-B 144 nt-1.74□□□□□ -2.69
MDE1P47095 YKL096C-BYKL096C-B 150 nt-1.77□□□□□ -2.69
MDE1P47095 YDR543CYDR543C 300 nt-1.96□□□□□ -2.72
MDE1P47095 snR40snR40 97 nt-1.96□□□□□ -2.72
MDE1P47095 YOL166W-AYOL166W-A 156 nt-2.01□□□□□ -2.73
MDE1P47095 snR58snR58 96 nt-2.15□□□□□ -2.75
MDE1P47095 snR87snR87 109 nt-2.24□□□□□ -2.77
MDE1P47095 tC(GCA)QtC(GCA)Q 76 nt-2.35□□□□□ -2.79
MDE1P47095 snR75snR75 89 nt-2.39□□□□□ -2.79
MDE1P47095 YJR162CYJR162C 351 nt-2.84□□□□□ -2.86
MDE1P47095 YJL136W-AYJL136W-A 84 nt-3.7□□□□□ -3
Retrieved 29 of 7,029 protein–RNA pairs in 87.5 ms