Protein–RNA interactions for Protein: P40343

VPS27, Vacuolar protein sorting-associated protein 27, yeastyeast

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS27P40343 YMR326CYMR326C 309 nt-0.84□□□□□ -2.54
VPS27P40343 YNR077CYNR077C 255 nt-0.84□□□□□ -2.54
VPS27P40343 YMR315W-AYMR315W-A 108 nt-0.9□□□□□ -2.55
VPS27P40343 snR64snR64 101 nt-0.91□□□□□ -2.56
VPS27P40343 YLL066W-BYLL066W-B 171 nt-0.91□□□□□ -2.56
VPS27P40343 tY(GUA)QtY(GUA)Q 84 nt-0.93□□□□□ -2.56
VPS27P40343 tV(UAC)QtV(UAC)Q 76 nt-0.94□□□□□ -2.56
VPS27P40343 YGR122C-AYGR122C-A 129 nt-0.95□□□□□ -2.56
VPS27P40343 YDL114W-AYDL114W-A 114 nt-0.98□□□□□ -2.57
VPS27P40343 snR6snR6 112 nt-1.03□□□□□ -2.57
VPS27P40343 YDR524C-AYDR524C-A 120 nt-1.03□□□□□ -2.57
VPS27P40343 YOR335W-AYOR335W-A 81 nt-1.07□□□□□ -2.58
VPS27P40343 YOR309CYOR309C 381 nt-1.09□□□□□ -2.58
VPS27P40343 snR53snR53 91 nt-1.17□□□□□ -2.6
VPS27P40343 snR73snR73 106 nt-1.19□□□□□ -2.6
VPS27P40343 YDL247W-AYDL247W-A 75 nt-1.2□□□□□ -2.6
VPS27P40343 YBR126W-BYBR126W-B 144 nt-1.22□□□□□ -2.6
VPS27P40343 YLR149C-AYLR149C-A 87 nt-1.27□□□□□ -2.61
VPS27P40343 RPL41BYDL133C-A 78 nt-1.31□□□□□ -2.62
VPS27P40343 YKL096C-BYKL096C-B 150 nt-1.47□□□□□ -2.64
VPS27P40343 YDR543CYDR543C 300 nt-1.54□□□□□ -2.66
VPS27P40343 snR40snR40 97 nt-1.64□□□□□ -2.67
VPS27P40343 snR87snR87 109 nt-1.75□□□□□ -2.69
VPS27P40343 YOL166W-AYOL166W-A 156 nt-1.79□□□□□ -2.7
VPS27P40343 snR58snR58 96 nt-1.88□□□□□ -2.71
VPS27P40343 tC(GCA)QtC(GCA)Q 76 nt-2.02□□□□□ -2.73
VPS27P40343 snR75snR75 89 nt-2.08□□□□□ -2.74
VPS27P40343 YJR162CYJR162C 351 nt-2.15□□□□□ -2.75
VPS27P40343 YJL136W-AYJL136W-A 84 nt-2.61□□□□□ -2.83
Retrieved 29 of 7,029 protein–RNA pairs in 57.3 ms