Protein–RNA interactions for Protein: P40318

SSM4, ERAD-associated E3 ubiquitin-protein ligase DOA10, yeastyeast

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSM4P40318 snR62snR62 100 nt-1.32□□□□□ -2.62
SSM4P40318 YDL159W-AYDL159W-A 132 nt-1.32□□□□□ -2.62
SSM4P40318 tV(UAC)QtV(UAC)Q 76 nt-1.32□□□□□ -2.62
SSM4P40318 YDL114W-AYDL114W-A 114 nt-1.33□□□□□ -2.62
SSM4P40318 YOR335W-AYOR335W-A 81 nt-1.37□□□□□ -2.63
SSM4P40318 YGR122C-AYGR122C-A 129 nt-1.42□□□□□ -2.64
SSM4P40318 snR73snR73 106 nt-1.43□□□□□ -2.64
SSM4P40318 snR64snR64 101 nt-1.44□□□□□ -2.64
SSM4P40318 RPL41BYDL133C-A 78 nt-1.46□□□□□ -2.64
SSM4P40318 snR85snR85 171 nt-1.46□□□□□ -2.64
SSM4P40318 YMR326CYMR326C 309 nt-1.52□□□□□ -2.65
SSM4P40318 YHR217CYHR217C 462 nt-1.57□□□□□ -2.66
SSM4P40318 YOL166W-AYOL166W-A 156 nt-1.58□□□□□ -2.66
SSM4P40318 YLL066W-BYLL066W-B 171 nt-1.64□□□□□ -2.67
SSM4P40318 YBR126W-BYBR126W-B 144 nt-1.67□□□□□ -2.68
SSM4P40318 YKL096C-BYKL096C-B 150 nt-1.76□□□□□ -2.69
SSM4P40318 YBL109WYBL109W 336 nt-1.77□□□□□ -2.69
SSM4P40318 snR53snR53 91 nt-1.78□□□□□ -2.69
SSM4P40318 YLR149C-AYLR149C-A 87 nt-1.84□□□□□ -2.7
SSM4P40318 YDR524C-AYDR524C-A 120 nt-1.91□□□□□ -2.71
SSM4P40318 YDR543CYDR543C 300 nt-1.92□□□□□ -2.72
SSM4P40318 snR87snR87 109 nt-1.96□□□□□ -2.72
SSM4P40318 snR58snR58 96 nt-2.04□□□□□ -2.74
SSM4P40318 snR40snR40 97 nt-2.04□□□□□ -2.74
SSM4P40318 YDL247W-AYDL247W-A 75 nt-2.06□□□□□ -2.74
SSM4P40318 tC(GCA)QtC(GCA)Q 76 nt-2.29□□□□□ -2.78
SSM4P40318 snR75snR75 89 nt-2.7□□□□□ -2.84
SSM4P40318 YJL136W-AYJL136W-A 84 nt-2.93□□□□□ -2.88
SSM4P40318 YJR162CYJR162C 351 nt-3.07□□□□□ -2.9
Retrieved 29 of 7,029 protein–RNA pairs in 7.5 ms