Protein–RNA interactions for Protein: P40107

VRG4, GDP-mannose transporter 1, yeastyeast

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VRG4P40107 snR77snR77 88 nt-0.21□□□□□ -2.44
VRG4P40107 snR161snR161 161 nt-0.22□□□□□ -2.44
VRG4P40107 YKL096C-BYKL096C-B 150 nt-0.24□□□□□ -2.45
VRG4P40107 YNR077CYNR077C 255 nt-0.41□□□□□ -2.48
VRG4P40107 URB1YKL014C 5295 nt-0.45□□□□□ -2.48
VRG4P40107 CDC65tQ(CUG)M 72 nt-0.48□□□□□ -2.49
VRG4P40107 snR75snR75 89 nt-0.51□□□□□ -2.49
VRG4P40107 snR6snR6 112 nt-0.54□□□□□ -2.5
VRG4P40107 tT(UGU)G1tT(UGU)G1 72 nt-0.54□□□□□ -2.5
VRG4P40107 tT(UGU)G2tT(UGU)G2 72 nt-0.54□□□□□ -2.5
VRG4P40107 tT(UGU)PtT(UGU)P 72 nt-0.54□□□□□ -2.5
VRG4P40107 YOR335W-AYOR335W-A 81 nt-0.56□□□□□ -2.5
VRG4P40107 snR33snR33 183 nt-0.56□□□□□ -2.5
VRG4P40107 tP(UGG)QtP(UGG)Q 72 nt-0.59□□□□□ -2.5
VRG4P40107 YMR315W-AYMR315W-A 108 nt-0.6□□□□□ -2.51
VRG4P40107 snR40snR40 97 nt-0.63□□□□□ -2.51
VRG4P40107 snR73snR73 106 nt-0.7□□□□□ -2.52
VRG4P40107 YBR223W-AYBR223W-A 120 nt-0.72□□□□□ -2.52
VRG4P40107 RPL41BYDL133C-A 78 nt-0.73□□□□□ -2.53
VRG4P40107 YOR309CYOR309C 381 nt-0.82□□□□□ -2.54
VRG4P40107 tY(GUA)QtY(GUA)Q 84 nt-1.04□□□□□ -2.58
VRG4P40107 snR58snR58 96 nt-1.15□□□□□ -2.59
VRG4P40107 tC(GCA)QtC(GCA)Q 76 nt-1.17□□□□□ -2.6
VRG4P40107 snR87snR87 109 nt-1.28□□□□□ -2.61
VRG4P40107 YOL166W-AYOL166W-A 156 nt-1.49□□□□□ -2.65
VRG4P40107 YDR543CYDR543C 300 nt-1.58□□□□□ -2.66
VRG4P40107 YBR126W-BYBR126W-B 144 nt-1.65□□□□□ -2.67
VRG4P40107 YJR162CYJR162C 351 nt-2.59□□□□□ -2.82
VRG4P40107 YJL136W-AYJL136W-A 84 nt-2.69□□□□□ -2.84
Retrieved 29 of 7,029 protein–RNA pairs in 57.5 ms