Protein–RNA interactions for Protein: P39980

SIT1, Siderophore iron transporter 1, yeastyeast

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SIT1P39980 snR77snR77 88 nt-0.47□□□□□ -2.48
SIT1P39980 YJL113WYJL113W 4647 nt-0.54□□□□□ -2.5
SIT1P39980 YHL009W-BYHL009W-B 5409 nt-0.62□□□□□ -2.51
SIT1P39980 YKL096C-BYKL096C-B 150 nt-0.63□□□□□ -2.51
SIT1P39980 snR33snR33 183 nt-0.7□□□□□ -2.52
SIT1P39980 tT(UGU)G1tT(UGU)G1 72 nt-0.79□□□□□ -2.54
SIT1P39980 tT(UGU)G2tT(UGU)G2 72 nt-0.79□□□□□ -2.54
SIT1P39980 tT(UGU)PtT(UGU)P 72 nt-0.79□□□□□ -2.54
SIT1P39980 CDC65tQ(CUG)M 72 nt-0.85□□□□□ -2.55
SIT1P39980 tP(UGG)QtP(UGG)Q 72 nt-0.91□□□□□ -2.56
SIT1P39980 YMR315W-AYMR315W-A 108 nt-0.97□□□□□ -2.56
SIT1P39980 snR75snR75 89 nt-1.03□□□□□ -2.57
SIT1P39980 RPL41BYDL133C-A 78 nt-1.04□□□□□ -2.58
SIT1P39980 snR6snR6 112 nt-1.05□□□□□ -2.58
SIT1P39980 YOR335W-AYOR335W-A 81 nt-1.06□□□□□ -2.58
SIT1P39980 snR40snR40 97 nt-1.14□□□□□ -2.59
SIT1P39980 YBR223W-AYBR223W-A 120 nt-1.14□□□□□ -2.59
SIT1P39980 YNR077CYNR077C 255 nt-1.19□□□□□ -2.6
SIT1P39980 snR73snR73 106 nt-1.26□□□□□ -2.61
SIT1P39980 tY(GUA)QtY(GUA)Q 84 nt-1.33□□□□□ -2.62
SIT1P39980 YOR309CYOR309C 381 nt-1.37□□□□□ -2.63
SIT1P39980 snR58snR58 96 nt-1.74□□□□□ -2.69
SIT1P39980 tC(GCA)QtC(GCA)Q 76 nt-1.84□□□□□ -2.7
SIT1P39980 YBR126W-BYBR126W-B 144 nt-2.02□□□□□ -2.73
SIT1P39980 snR87snR87 109 nt-2.1□□□□□ -2.75
SIT1P39980 YDR543CYDR543C 300 nt-2.59□□□□□ -2.82
SIT1P39980 YOL166W-AYOL166W-A 156 nt-2.83□□□□□ -2.86
SIT1P39980 YJL136W-AYJL136W-A 84 nt-3.54□□□□□ -2.98
SIT1P39980 YJR162CYJR162C 351 nt-3.64□□□□□ -2.99
Retrieved 29 of 7,029 protein–RNA pairs in 47.5 ms