Protein–RNA interactions for Protein: P39904

VPS52, Vacuolar protein sorting-associated protein 52, yeastyeast

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS52P39904 YDL159W-AYDL159W-A 132 nt-0.76□□□□□ -2.53
VPS52P39904 YGR122C-AYGR122C-A 129 nt-0.78□□□□□ -2.53
VPS52P39904 snR77snR77 88 nt-0.81□□□□□ -2.54
VPS52P39904 snR53snR53 91 nt-0.82□□□□□ -2.54
VPS52P39904 YDL114W-AYDL114W-A 114 nt-0.83□□□□□ -2.54
VPS52P39904 YBR223W-AYBR223W-A 120 nt-0.88□□□□□ -2.55
VPS52P39904 CDC65tQ(CUG)M 72 nt-0.9□□□□□ -2.55
VPS52P39904 tV(UAC)QtV(UAC)Q 76 nt-0.91□□□□□ -2.56
VPS52P39904 YNR077CYNR077C 255 nt-0.92□□□□□ -2.56
VPS52P39904 tP(UGG)QtP(UGG)Q 72 nt-0.95□□□□□ -2.56
VPS52P39904 YMR315W-AYMR315W-A 108 nt-1.03□□□□□ -2.57
VPS52P39904 YLR149C-AYLR149C-A 87 nt-1.11□□□□□ -2.59
VPS52P39904 snR6snR6 112 nt-1.23□□□□□ -2.61
VPS52P39904 RPL41BYDL133C-A 78 nt-1.23□□□□□ -2.61
VPS52P39904 YOR335W-AYOR335W-A 81 nt-1.28□□□□□ -2.61
VPS52P39904 tY(GUA)QtY(GUA)Q 84 nt-1.36□□□□□ -2.63
VPS52P39904 YKL096C-BYKL096C-B 150 nt-1.38□□□□□ -2.63
VPS52P39904 YOR309CYOR309C 381 nt-1.38□□□□□ -2.63
VPS52P39904 snR73snR73 106 nt-1.41□□□□□ -2.64
VPS52P39904 snR40snR40 97 nt-1.63□□□□□ -2.67
VPS52P39904 YBR126W-BYBR126W-B 144 nt-1.83□□□□□ -2.7
VPS52P39904 snR75snR75 89 nt-1.84□□□□□ -2.7
VPS52P39904 snR58snR58 96 nt-1.86□□□□□ -2.71
VPS52P39904 YDR543CYDR543C 300 nt-2.02□□□□□ -2.73
VPS52P39904 tC(GCA)QtC(GCA)Q 76 nt-2.04□□□□□ -2.74
VPS52P39904 YOL166W-AYOL166W-A 156 nt-2.1□□□□□ -2.75
VPS52P39904 snR87snR87 109 nt-2.12□□□□□ -2.75
VPS52P39904 YJR162CYJR162C 351 nt-2.98□□□□□ -2.89
VPS52P39904 YJL136W-AYJL136W-A 84 nt-3.58□□□□□ -2.98
Retrieved 29 of 7,029 protein–RNA pairs in 12.1 ms