Protein–RNA interactions for Protein: P38915

SPT8, Transcription factor SPT8, yeastyeast

Predictions only

Length 602 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SPT8P38915 snR62snR62 100 nt-1.85□□□□□ -2.71
SPT8P38915 YDL114W-AYDL114W-A 114 nt-1.87□□□□□ -2.71
SPT8P38915 YDL159W-AYDL159W-A 132 nt-1.91□□□□□ -2.72
SPT8P38915 YDR543CYDR543C 300 nt-1.91□□□□□ -2.72
SPT8P38915 snR73snR73 106 nt-1.94□□□□□ -2.72
SPT8P38915 ATP8Q0080 147 nt-1.97□□□□□ -2.72
SPT8P38915 YGR122C-AYGR122C-A 129 nt-2□□□□□ -2.73
SPT8P38915 snR64snR64 101 nt-2.04□□□□□ -2.74
SPT8P38915 RPL41BYDL133C-A 78 nt-2.06□□□□□ -2.74
SPT8P38915 snR85snR85 171 nt-2.08□□□□□ -2.74
SPT8P38915 Q0143Q0143 153 nt-2.18□□□□□ -2.76
SPT8P38915 YOL166W-AYOL166W-A 156 nt-2.28□□□□□ -2.77
SPT8P38915 YHR217CYHR217C 462 nt-2.29□□□□□ -2.78
SPT8P38915 Q0092Q0092 141 nt-2.32□□□□□ -2.78
SPT8P38915 YMR326CYMR326C 309 nt-2.32□□□□□ -2.78
SPT8P38915 YLL066W-BYLL066W-B 171 nt-2.35□□□□□ -2.79
SPT8P38915 YKL096C-BYKL096C-B 150 nt-2.45□□□□□ -2.8
SPT8P38915 YBL109WYBL109W 336 nt-2.45□□□□□ -2.8
SPT8P38915 snR53snR53 91 nt-2.47□□□□□ -2.8
SPT8P38915 YLR149C-AYLR149C-A 87 nt-2.57□□□□□ -2.82
SPT8P38915 YDR524C-AYDR524C-A 120 nt-2.64□□□□□ -2.83
SPT8P38915 snR87snR87 109 nt-2.68□□□□□ -2.84
SPT8P38915 YJR162CYJR162C 351 nt-2.71□□□□□ -2.84
SPT8P38915 snR58snR58 96 nt-2.85□□□□□ -2.87
SPT8P38915 snR40snR40 97 nt-2.87□□□□□ -2.87
SPT8P38915 YDL247W-AYDL247W-A 75 nt-2.9□□□□□ -2.87
SPT8P38915 tC(GCA)QtC(GCA)Q 76 nt-3.14□□□□□ -2.91
SPT8P38915 YJL136W-AYJL136W-A 84 nt-3.58□□□□□ -2.98
SPT8P38915 snR75snR75 89 nt-3.78□□□□□ -3.01
Retrieved 29 of 7,029 protein–RNA pairs in 85.4 ms