Protein–RNA interactions for Protein: P38878

LNP1, Endoplasmic reticulum junction formation protein lunapark, yeastyeast

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LNP1P38878 snR77snR77 88 nt-0.74□□□□□ -2.53
LNP1P38878 YDL114W-AYDL114W-A 114 nt-0.76□□□□□ -2.53
LNP1P38878 tT(UGU)G1tT(UGU)G1 72 nt-0.77□□□□□ -2.53
LNP1P38878 tT(UGU)G2tT(UGU)G2 72 nt-0.77□□□□□ -2.53
LNP1P38878 tT(UGU)PtT(UGU)P 72 nt-0.77□□□□□ -2.53
LNP1P38878 snR33snR33 183 nt-0.77□□□□□ -2.53
LNP1P38878 YNR077CYNR077C 255 nt-0.82□□□□□ -2.54
LNP1P38878 CDC65tQ(CUG)M 72 nt-0.86□□□□□ -2.55
LNP1P38878 YLR149C-AYLR149C-A 87 nt-0.86□□□□□ -2.55
LNP1P38878 YBR223W-AYBR223W-A 120 nt-0.94□□□□□ -2.56
LNP1P38878 tP(UGG)QtP(UGG)Q 72 nt-1□□□□□ -2.57
LNP1P38878 snR6snR6 112 nt-1.1□□□□□ -2.59
LNP1P38878 YMR315W-AYMR315W-A 108 nt-1.11□□□□□ -2.59
LNP1P38878 YKL096C-BYKL096C-B 150 nt-1.21□□□□□ -2.6
LNP1P38878 YOR335W-AYOR335W-A 81 nt-1.23□□□□□ -2.61
LNP1P38878 snR73snR73 106 nt-1.36□□□□□ -2.63
LNP1P38878 RPL41BYDL133C-A 78 nt-1.37□□□□□ -2.63
LNP1P38878 YOR309CYOR309C 381 nt-1.4□□□□□ -2.63
LNP1P38878 tY(GUA)QtY(GUA)Q 84 nt-1.47□□□□□ -2.64
LNP1P38878 snR40snR40 97 nt-1.58□□□□□ -2.66
LNP1P38878 snR75snR75 89 nt-1.75□□□□□ -2.69
LNP1P38878 snR58snR58 96 nt-1.94□□□□□ -2.72
LNP1P38878 YBR126W-BYBR126W-B 144 nt-1.98□□□□□ -2.73
LNP1P38878 tC(GCA)QtC(GCA)Q 76 nt-2.11□□□□□ -2.75
LNP1P38878 snR87snR87 109 nt-2.16□□□□□ -2.76
LNP1P38878 YDR543CYDR543C 300 nt-2.2□□□□□ -2.76
LNP1P38878 YOL166W-AYOL166W-A 156 nt-2.24□□□□□ -2.77
LNP1P38878 YJR162CYJR162C 351 nt-3.23□□□□□ -2.93
LNP1P38878 YJL136W-AYJL136W-A 84 nt-3.89□□□□□ -3.03
Retrieved 29 of 7,029 protein–RNA pairs in 45.7 ms