Protein–RNA interactions for Protein: P38828

LSM12, Protein LSM12, yeast

Known RBP Predictions only

Length 187 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
LSM12	P38828	snR64	snR64	101 nt		-1.38	□□□□□ -2.63
LSM12	P38828	snR85	snR85	171 nt		-1.4	□□□□□ -2.63
LSM12	P38828	YDL114W-A	YDL114W-A	114 nt		-1.41	□□□□□ -2.64
LSM12	P38828	YBL109W	YBL109W	336 nt		-1.42	□□□□□ -2.64
LSM12	P38828	tV(UAC)Q	tV(UAC)Q	76 nt		-1.43	□□□□□ -2.64
LSM12	P38828	YGR122C-A	YGR122C-A	129 nt		-1.44	□□□□□ -2.64
LSM12	P38828	YNR077C	YNR077C	255 nt		-1.44	□□□□□ -2.64
LSM12	P38828	tY(GUA)Q	tY(GUA)Q	84 nt		-1.48	□□□□□ -2.65
LSM12	P38828	YLL066W-B	YLL066W-B	171 nt		-1.48	□□□□□ -2.65
LSM12	P38828	snR6	snR6	112 nt		-1.54	□□□□□ -2.66
LSM12	P38828	YOR309C	YOR309C	381 nt		-1.54	□□□□□ -2.66
LSM12	P38828	YOR335W-A	YOR335W-A	81 nt		-1.59	□□□□□ -2.66
LSM12	P38828	snR73	snR73	106 nt		-1.71	□□□□□ -2.68
LSM12	P38828	RPL41B	YDL133C-A	78 nt		-1.71	□□□□□ -2.68
LSM12	P38828	YDR524C-A	YDR524C-A	120 nt		-1.71	□□□□□ -2.68
LSM12	P38828	snR53	snR53	91 nt		-1.75	□□□□□ -2.69
LSM12	P38828	YDL247W-A	YDL247W-A	75 nt		-1.82	□□□□□ -2.7
LSM12	P38828	YLR149C-A	YLR149C-A	87 nt		-1.92	□□□□□ -2.72
LSM12	P38828	YKL096C-B	YKL096C-B	150 nt		-2.05	□□□□□ -2.74
LSM12	P38828	YBR126W-B	YBR126W-B	144 nt		-2.31	□□□□□ -2.78
LSM12	P38828	snR40	snR40	97 nt		-2.33	□□□□□ -2.78
LSM12	P38828	snR87	snR87	109 nt		-2.45	□□□□□ -2.8
LSM12	P38828	snR58	snR58	96 nt		-2.47	□□□□□ -2.8
LSM12	P38828	tC(GCA)Q	tC(GCA)Q	76 nt		-2.71	□□□□□ -2.84
LSM12	P38828	YDR543C	YDR543C	300 nt		-2.85	□□□□□ -2.87
LSM12	P38828	snR75	snR75	89 nt		-2.94	□□□□□ -2.88
LSM12	P38828	YOL166W-A	YOL166W-A	156 nt		-3.15	□□□□□ -2.91
LSM12	P38828	YJL136W-A	YJL136W-A	84 nt		-3.94	□□□□□ -3.04
LSM12	P38828	YJR162C	YJR162C	351 nt		-4.04	□□□□□ -3.06

Retrieved 29 of 7,029 protein–RNA pairs in 72.7 ms