Protein–RNA interactions for Protein: P38798

NMD2, Nonsense-mediated mRNA decay protein 2, yeastyeast

Known RBP Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NMD2P38798 YDL114W-AYDL114W-A 114 nt-0.67□□□□□ -2.52
NMD2P38798 snR53snR53 91 nt-0.68□□□□□ -2.52
NMD2P38798 tP(UGG)QtP(UGG)Q 72 nt-0.7□□□□□ -2.52
NMD2P38798 tV(UAC)QtV(UAC)Q 76 nt-0.7□□□□□ -2.52
NMD2P38798 CDC65tQ(CUG)M 72 nt-0.71□□□□□ -2.52
NMD2P38798 tT(UGU)G1tT(UGU)G1 72 nt-0.72□□□□□ -2.52
NMD2P38798 tT(UGU)G2tT(UGU)G2 72 nt-0.72□□□□□ -2.52
NMD2P38798 tT(UGU)PtT(UGU)P 72 nt-0.72□□□□□ -2.52
NMD2P38798 YMR315W-AYMR315W-A 108 nt-0.81□□□□□ -2.54
NMD2P38798 YLR149C-AYLR149C-A 87 nt-0.85□□□□□ -2.55
NMD2P38798 YNR077CYNR077C 255 nt-0.89□□□□□ -2.55
NMD2P38798 snR6snR6 112 nt-0.94□□□□□ -2.56
NMD2P38798 YOR335W-AYOR335W-A 81 nt-0.96□□□□□ -2.56
NMD2P38798 YBR223W-AYBR223W-A 120 nt-1□□□□□ -2.57
NMD2P38798 RPL41BYDL133C-A 78 nt-1.06□□□□□ -2.58
NMD2P38798 YOR309CYOR309C 381 nt-1.06□□□□□ -2.58
NMD2P38798 snR73snR73 106 nt-1.08□□□□□ -2.58
NMD2P38798 tY(GUA)QtY(GUA)Q 84 nt-1.13□□□□□ -2.59
NMD2P38798 YKL096C-BYKL096C-B 150 nt-1.16□□□□□ -2.6
NMD2P38798 snR40snR40 97 nt-1.29□□□□□ -2.62
NMD2P38798 snR75snR75 89 nt-1.5□□□□□ -2.65
NMD2P38798 snR58snR58 96 nt-1.6□□□□□ -2.67
NMD2P38798 snR87snR87 109 nt-1.67□□□□□ -2.68
NMD2P38798 tC(GCA)QtC(GCA)Q 76 nt-1.73□□□□□ -2.69
NMD2P38798 YBR126W-BYBR126W-B 144 nt-1.83□□□□□ -2.7
NMD2P38798 YOL166W-AYOL166W-A 156 nt-2.3□□□□□ -2.78
NMD2P38798 YDR543CYDR543C 300 nt-2.32□□□□□ -2.78
NMD2P38798 YJL136W-AYJL136W-A 84 nt-2.93□□□□□ -2.88
NMD2P38798 YJR162CYJR162C 351 nt-3.43□□□□□ -2.96
Retrieved 29 of 7,029 protein–RNA pairs in 6.9 ms