Protein–RNA interactions for Protein: P38307

DER1, Degradation in the endoplasmic reticulum protein 1, yeastyeast

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DER1P38307 YDR034C-AYDR034C-A 177 nt-4.29□□□□□ -3.1
DER1P38307 snR58snR58 96 nt-4.32□□□□□ -3.1
DER1P38307 YGL007C-AYGL007C-A 87 nt-4.37□□□□□ -3.11
DER1P38307 YGL041C-BYGL041C-B 183 nt-4.44□□□□□ -3.12
DER1P38307 YLR466C-BYLR466C-B 117 nt-4.45□□□□□ -3.12
DER1P38307 YNL338WYNL338W 159 nt-4.53□□□□□ -3.13
DER1P38307 snR62snR62 100 nt-4.54□□□□□ -3.14
DER1P38307 snR64snR64 101 nt-4.54□□□□□ -3.14
DER1P38307 tM(CAU)Q1tM(CAU)Q1 76 nt-4.56□□□□□ -3.14
DER1P38307 snR61snR61 90 nt-4.67□□□□□ -3.16
DER1P38307 YNL103W-AYNL103W-A 90 nt-4.69□□□□□ -3.16
DER1P38307 YNL170WYNL170W 396 nt-4.7□□□□□ -3.16
DER1P38307 YLR294CYLR294C 330 nt-4.77□□□□□ -3.17
DER1P38307 YOR225WYOR225W 330 nt-4.77□□□□□ -3.17
DER1P38307 tC(GCA)QtC(GCA)Q 76 nt-4.95□□□□□ -3.2
DER1P38307 YJL136W-AYJL136W-A 84 nt-5.03□□□□□ -3.21
DER1P38307 Q0032Q0032 291 nt-5.04□□□□□ -3.22
DER1P38307 snR40snR40 97 nt-5.13□□□□□ -3.23
DER1P38307 YLR149C-AYLR149C-A 87 nt-5.32□□□□□ -3.26
DER1P38307 snR53snR53 91 nt-5.34□□□□□ -3.26
DER1P38307 YLL066W-BYLL066W-B 171 nt-5.59□□□□□ -3.3
DER1P38307 YHR217CYHR217C 462 nt-5.85□□□□□ -3.35
DER1P38307 YMR326CYMR326C 309 nt-5.85□□□□□ -3.35
DER1P38307 Q0143Q0143 153 nt-6.19□□□□□ -3.4
DER1P38307 ATP8Q0080 147 nt-6.24□□□□□ -3.41
DER1P38307 YBL109WYBL109W 336 nt-6.59□□□□□ -3.46
DER1P38307 YDL247W-AYDL247W-A 75 nt-6.73□□□□□ -3.49
DER1P38307 snR75snR75 89 nt-7.05□□□□□ -3.54
DER1P38307 Q0092Q0092 141 nt-7.11□□□□□ -3.55
Retrieved 29 of 7,029 protein–RNA pairs in 6.2 ms