Protein–RNA interactions for Protein: P38287

CSH1, Mannosyl phosphorylinositol ceramide synthase CSH1, yeastyeast

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CSH1P38287 YGR122C-AYGR122C-A 129 nt-3.36□□□□□ -2.95
CSH1P38287 YJR162CYJR162C 351 nt-3.37□□□□□ -2.95
CSH1P38287 YGL007C-AYGL007C-A 87 nt-3.4□□□□□ -2.95
CSH1P38287 YDL159W-AYDL159W-A 132 nt-3.44□□□□□ -2.96
CSH1P38287 snR62snR62 100 nt-3.48□□□□□ -2.97
CSH1P38287 snR61snR61 90 nt-3.5□□□□□ -2.97
CSH1P38287 YNL103W-AYNL103W-A 90 nt-3.54□□□□□ -2.98
CSH1P38287 YKL096C-BYKL096C-B 150 nt-3.56□□□□□ -2.98
CSH1P38287 snR64snR64 101 nt-3.58□□□□□ -2.98
CSH1P38287 snR87snR87 109 nt-3.59□□□□□ -2.98
CSH1P38287 YNL170WYNL170W 396 nt-3.62□□□□□ -2.99
CSH1P38287 Q0032Q0032 291 nt-3.73□□□□□ -3.01
CSH1P38287 snR58snR58 96 nt-3.75□□□□□ -3.01
CSH1P38287 YLR294CYLR294C 330 nt-3.86□□□□□ -3.03
CSH1P38287 YOR225WYOR225W 330 nt-3.91□□□□□ -3.04
CSH1P38287 snR53snR53 91 nt-4.23□□□□□ -3.09
CSH1P38287 tC(GCA)QtC(GCA)Q 76 nt-4.25□□□□□ -3.09
CSH1P38287 YLR149C-AYLR149C-A 87 nt-4.3□□□□□ -3.1
CSH1P38287 snR40snR40 97 nt-4.31□□□□□ -3.1
CSH1P38287 YLL066W-BYLL066W-B 171 nt-4.36□□□□□ -3.11
CSH1P38287 YJL136W-AYJL136W-A 84 nt-4.4□□□□□ -3.11
CSH1P38287 YHR217CYHR217C 462 nt-4.46□□□□□ -3.12
CSH1P38287 YMR326CYMR326C 309 nt-4.46□□□□□ -3.12
CSH1P38287 ATP8Q0080 147 nt-4.57□□□□□ -3.14
CSH1P38287 Q0143Q0143 153 nt-4.65□□□□□ -3.15
CSH1P38287 YBL109WYBL109W 336 nt-5.03□□□□□ -3.21
CSH1P38287 YDL247W-AYDL247W-A 75 nt-5.21□□□□□ -3.24
CSH1P38287 Q0092Q0092 141 nt-5.24□□□□□ -3.25
CSH1P38287 snR75snR75 89 nt-5.81□□□□□ -3.34
Retrieved 29 of 7,029 protein–RNA pairs in 3 ms