Protein–RNA interactions for Protein: P35210

SPT23, Protein SPT23, yeastyeast

Predictions only

Length 1,082 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SPT23P35210 tT(AGU)O1tT(AGU)O1 73 nt0.74□□□□□ -2.29
SPT23P35210 tT(AGU)O2tT(AGU)O2 73 nt0.74□□□□□ -2.29
SPT23P35210 YPR159C-AYPR159C-A 102 nt0.73□□□□□ -2.29
SPT23P35210 snR58snR58 96 nt0.69□□□□□ -2.3
SPT23P35210 UTP10YJL109C 5310 nt0.67□□□□□ -2.3
SPT23P35210 snR128snR128 126 nt0.66□□□□□ -2.3
SPT23P35210 snR161snR161 161 nt0.64□□□□□ -2.31
SPT23P35210 snR73snR73 106 nt0.61□□□□□ -2.31
SPT23P35210 tA(UGC)QtA(UGC)Q 76 nt0.59□□□□□ -2.31
SPT23P35210 YOL013W-AYOL013W-A 192 nt0.43□□□□□ -2.34
SPT23P35210 URB1YKL014C 5295 nt0.28□□□□□ -2.36
SPT23P35210 CDC65tQ(CUG)M 72 nt0.26□□□□□ -2.37
SPT23P35210 YMR315W-AYMR315W-A 108 nt0.2□□□□□ -2.38
SPT23P35210 snR87snR87 109 nt0.04□□□□□ -2.4
SPT23P35210 YOR309CYOR309C 381 nt-0.06□□□□□ -2.42
SPT23P35210 YHL009W-BYHL009W-B 5409 nt-0.13□□□□□ -2.43
SPT23P35210 tP(UGG)QtP(UGG)Q 72 nt-0.27□□□□□ -2.45
SPT23P35210 snR33snR33 183 nt-0.43□□□□□ -2.48
SPT23P35210 tT(UGU)G1tT(UGU)G1 72 nt-0.63□□□□□ -2.51
SPT23P35210 tT(UGU)G2tT(UGU)G2 72 nt-0.63□□□□□ -2.51
SPT23P35210 tT(UGU)PtT(UGU)P 72 nt-0.63□□□□□ -2.51
SPT23P35210 YNR077CYNR077C 255 nt-0.66□□□□□ -2.52
SPT23P35210 tY(GUA)QtY(GUA)Q 84 nt-0.83□□□□□ -2.54
SPT23P35210 YBR223W-AYBR223W-A 120 nt-0.85□□□□□ -2.55
SPT23P35210 YBR126W-BYBR126W-B 144 nt-1.49□□□□□ -2.65
SPT23P35210 YOL166W-AYOL166W-A 156 nt-1.74□□□□□ -2.69
SPT23P35210 YJL136W-AYJL136W-A 84 nt-1.84□□□□□ -2.7
SPT23P35210 YDR543CYDR543C 300 nt-1.95□□□□□ -2.72
SPT23P35210 YJR162CYJR162C 351 nt-2.86□□□□□ -2.87
Retrieved 29 of 7,029 protein–RNA pairs in 6.5 ms