Protein–RNA interactions for Protein: P32842

VMA11, V-type proton ATPase subunit c', yeast

Predictions only

Length 164 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA11	P32842	RPL41B	YDL133C-A	78 nt		-2.16	□□□□□ -2.76
VMA11	P32842	YLR294C	YLR294C	330 nt		-2.17	□□□□□ -2.76
VMA11	P32842	YOR225W	YOR225W	330 nt		-2.17	□□□□□ -2.76
VMA11	P32842	YNL170W	YNL170W	396 nt		-2.21	□□□□□ -2.76
VMA11	P32842	snR85	snR85	171 nt		-2.25	□□□□□ -2.77
VMA11	P32842	YDR543C	YDR543C	300 nt		-2.27	□□□□□ -2.77
VMA11	P32842	YGR122C-A	YGR122C-A	129 nt		-2.27	□□□□□ -2.77
VMA11	P32842	YDL159W-A	YDL159W-A	132 nt		-2.28	□□□□□ -2.77
VMA11	P32842	snR64	snR64	101 nt		-2.32	□□□□□ -2.78
VMA11	P32842	ATP8	Q0080	147 nt		-2.46	□□□□□ -2.8
VMA11	P32842	YOL166W-A	YOL166W-A	156 nt		-2.46	□□□□□ -2.8
VMA11	P32842	Q0143	Q0143	153 nt		-2.65	□□□□□ -2.83
VMA11	P32842	YHR217C	YHR217C	462 nt		-2.66	□□□□□ -2.84
VMA11	P32842	YKL096C-B	YKL096C-B	150 nt		-2.66	□□□□□ -2.84
VMA11	P32842	YMR326C	YMR326C	309 nt		-2.7	□□□□□ -2.84
VMA11	P32842	YDR524C-A	YDR524C-A	120 nt		-2.72	□□□□□ -2.84
VMA11	P32842	YLL066W-B	YLL066W-B	171 nt		-2.75	□□□□□ -2.85
VMA11	P32842	snR53	snR53	91 nt		-2.75	□□□□□ -2.85
VMA11	P32842	snR87	snR87	109 nt		-2.85	□□□□□ -2.87
VMA11	P32842	Q0092	Q0092	141 nt		-2.87	□□□□□ -2.87
VMA11	P32842	YLR149C-A	YLR149C-A	87 nt		-2.89	□□□□□ -2.87
VMA11	P32842	snR58	snR58	96 nt		-2.94	□□□□□ -2.88
VMA11	P32842	YBL109W	YBL109W	336 nt		-2.98	□□□□□ -2.89
VMA11	P32842	snR40	snR40	97 nt		-3.15	□□□□□ -2.91
VMA11	P32842	YJR162C	YJR162C	351 nt		-3.24	□□□□□ -2.93
VMA11	P32842	YDL247W-A	YDL247W-A	75 nt		-3.28	□□□□□ -2.93
VMA11	P32842	tC(GCA)Q	tC(GCA)Q	76 nt		-3.28	□□□□□ -2.93
VMA11	P32842	snR75	snR75	89 nt		-4.14	□□□□□ -3.07
VMA11	P32842	YJL136W-A	YJL136W-A	84 nt		-4.26	□□□□□ -3.09

Retrieved 29 of 7,029 protein–RNA pairs in 32.5 ms