Protein–RNA interactions for Protein: P14576

Srp54, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54P14576 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Srp54P14576 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Srp54P14576 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Srp54P14576 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Srp54P14576 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Srp54P14576 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Srp54P14576 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Srp54P14576 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Srp54P14576 Gm23634-201ENSMUST00000175071 91 ntBASIC16.85■□□□□ 0.29
Srp54P14576 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.85■□□□□ 0.29
Srp54P14576 Mir8112-201ENSMUST00000184382 131 ntBASIC16.85■□□□□ 0.29
Srp54P14576 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Srp54P14576 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC16.85■□□□□ 0.29
Srp54P14576 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.85■□□□□ 0.29
Srp54P14576 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
Srp54P14576 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.85■□□□□ 0.29
Srp54P14576 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Srp54P14576 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Srp54P14576 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.84■□□□□ 0.29
Srp54P14576 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Srp54P14576 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.84■□□□□ 0.29
Srp54P14576 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Srp54P14576 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Srp54P14576 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Srp54P14576 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Srp54P14576 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Srp54P14576 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Srp54P14576 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Srp54P14576 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Srp54P14576 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Srp54P14576 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Srp54P14576 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.84■□□□□ 0.29
Srp54P14576 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Srp54P14576 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Srp54P14576 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Srp54P14576 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Srp54P14576 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Srp54P14576 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Srp54P14576 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.83■□□□□ 0.28
Srp54P14576 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
Srp54P14576 Gm7370-201ENSMUST00000219471 767 ntBASIC16.83■□□□□ 0.28
Srp54P14576 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Srp54P14576 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Srp54P14576 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Srp54P14576 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Srp54P14576 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Srp54P14576 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Srp54P14576 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Srp54P14576 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Srp54P14576 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Srp54P14576 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Srp54P14576 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Srp54P14576 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Srp54P14576 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Srp54P14576 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Srp54P14576 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Srp54P14576 Gm17661-201ENSMUST00000170317 270 ntBASIC16.82■□□□□ 0.28
Srp54P14576 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Srp54P14576 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Srp54P14576 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Srp54P14576 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Srp54P14576 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Srp54P14576 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Srp54P14576 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Srp54P14576 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Srp54P14576 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Srp54P14576 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Srp54P14576 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Srp54P14576 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Srp54P14576 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Srp54P14576 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Srp54P14576 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Srp54P14576 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Srp54P14576 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Srp54P14576 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Srp54P14576 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Srp54P14576 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Srp54P14576 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Srp54P14576 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Srp54P14576 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Srp54P14576 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Srp54P14576 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Srp54P14576 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Srp54P14576 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Srp54P14576 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Srp54P14576 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Srp54P14576 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Srp54P14576 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Srp54P14576 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Srp54P14576 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Srp54P14576 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Srp54P14576 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.81■□□□□ 0.28
Srp54P14576 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Srp54P14576 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Srp54P14576 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Srp54P14576 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Srp54P14576 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Srp54P14576 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Srp54P14576 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Srp54P14576 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms