Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccl1P10146 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccl1P10146 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Ccl1P10146 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccl1P10146 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccl1P10146 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC13.38□□□□□ -0.27
Ccl1P10146 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccl1P10146 Gm13216-201ENSMUST00000117145 591 ntBASIC13.38□□□□□ -0.27
Ccl1P10146 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC13.38□□□□□ -0.27
Ccl1P10146 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC13.38□□□□□ -0.27
Ccl1P10146 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccl1P10146 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccl1P10146 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Ccl1P10146 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ccl1P10146 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccl1P10146 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccl1P10146 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccl1P10146 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccl1P10146 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccl1P10146 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccl1P10146 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccl1P10146 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccl1P10146 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ccl1P10146 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccl1P10146 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
Ccl1P10146 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC13.37□□□□□ -0.27
Ccl1P10146 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccl1P10146 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccl1P10146 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Ccl1P10146 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccl1P10146 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccl1P10146 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccl1P10146 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccl1P10146 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccl1P10146 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccl1P10146 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccl1P10146 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccl1P10146 Gm14281-201ENSMUST00000121700 1294 ntBASIC13.37□□□□□ -0.27
Ccl1P10146 Gm8493-201ENSMUST00000196881 489 ntBASIC13.37□□□□□ -0.27
Ccl1P10146 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccl1P10146 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ccl1P10146 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccl1P10146 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccl1P10146 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ccl1P10146 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccl1P10146 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC13.37□□□□□ -0.27
Ccl1P10146 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Ccl1P10146 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccl1P10146 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccl1P10146 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccl1P10146 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccl1P10146 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ccl1P10146 AC125311.2-201ENSMUST00000227477 1940 ntBASIC13.37□□□□□ -0.27
Ccl1P10146 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccl1P10146 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ccl1P10146 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccl1P10146 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccl1P10146 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccl1P10146 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccl1P10146 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ccl1P10146 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Ccl1P10146 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccl1P10146 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC13.36□□□□□ -0.27
Ccl1P10146 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC13.36□□□□□ -0.27
Ccl1P10146 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccl1P10146 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccl1P10146 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Ccl1P10146 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccl1P10146 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccl1P10146 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccl1P10146 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Ccl1P10146 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Ccl1P10146 CT010467.1-202ENSMUST00000205406 714 ntBASIC13.36□□□□□ -0.27
Ccl1P10146 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccl1P10146 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ccl1P10146 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ccl1P10146 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccl1P10146 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Ccl1P10146 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccl1P10146 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccl1P10146 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccl1P10146 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccl1P10146 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccl1P10146 CT010478.1-201ENSMUST00000220747 2787 ntBASIC13.36□□□□□ -0.27
Ccl1P10146 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Ccl1P10146 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccl1P10146 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Ccl1P10146 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Ccl1P10146 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC13.35□□□□□ -0.27
Ccl1P10146 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccl1P10146 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccl1P10146 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccl1P10146 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccl1P10146 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccl1P10146 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccl1P10146 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccl1P10146 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccl1P10146 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Ccl1P10146 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccl1P10146 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms