Protein–RNA interactions for Protein: P0C2J4

TY2A-LR1, Transposon Ty2-LR1 Gag polyprotein, yeastyeast

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2A-LR1P0C2J4 YBL109WYBL109W 336 nt-0.82□□□□□ -2.54
TY2A-LR1P0C2J4 snR64snR64 101 nt-0.83□□□□□ -2.54
TY2A-LR1P0C2J4 YDL114W-AYDL114W-A 114 nt-0.83□□□□□ -2.54
TY2A-LR1P0C2J4 tV(UAC)QtV(UAC)Q 76 nt-0.83□□□□□ -2.54
TY2A-LR1P0C2J4 YGR122C-AYGR122C-A 129 nt-0.84□□□□□ -2.54
TY2A-LR1P0C2J4 tY(GUA)QtY(GUA)Q 84 nt-0.86□□□□□ -2.55
TY2A-LR1P0C2J4 YOR309CYOR309C 381 nt-0.86□□□□□ -2.55
TY2A-LR1P0C2J4 YLL066W-BYLL066W-B 171 nt-0.87□□□□□ -2.55
TY2A-LR1P0C2J4 snR6snR6 112 nt-0.88□□□□□ -2.55
TY2A-LR1P0C2J4 YBR223W-AYBR223W-A 120 nt-0.89□□□□□ -2.55
TY2A-LR1P0C2J4 YOR335W-AYOR335W-A 81 nt-0.9□□□□□ -2.55
TY2A-LR1P0C2J4 YNR077CYNR077C 255 nt-0.96□□□□□ -2.56
TY2A-LR1P0C2J4 snR73snR73 106 nt-0.98□□□□□ -2.57
TY2A-LR1P0C2J4 RPL41BYDL133C-A 78 nt-1.02□□□□□ -2.57
TY2A-LR1P0C2J4 YDR524C-AYDR524C-A 120 nt-1.02□□□□□ -2.57
TY2A-LR1P0C2J4 snR53snR53 91 nt-1.06□□□□□ -2.58
TY2A-LR1P0C2J4 YDL247W-AYDL247W-A 75 nt-1.12□□□□□ -2.59
TY2A-LR1P0C2J4 YLR149C-AYLR149C-A 87 nt-1.13□□□□□ -2.59
TY2A-LR1P0C2J4 YKL096C-BYKL096C-B 150 nt-1.2□□□□□ -2.6
TY2A-LR1P0C2J4 snR40snR40 97 nt-1.35□□□□□ -2.63
TY2A-LR1P0C2J4 YBR126W-BYBR126W-B 144 nt-1.36□□□□□ -2.63
TY2A-LR1P0C2J4 snR87snR87 109 nt-1.4□□□□□ -2.63
TY2A-LR1P0C2J4 snR58snR58 96 nt-1.49□□□□□ -2.65
TY2A-LR1P0C2J4 tC(GCA)QtC(GCA)Q 76 nt-1.61□□□□□ -2.67
TY2A-LR1P0C2J4 snR75snR75 89 nt-1.73□□□□□ -2.69
TY2A-LR1P0C2J4 YDR543CYDR543C 300 nt-2.03□□□□□ -2.73
TY2A-LR1P0C2J4 YOL166W-AYOL166W-A 156 nt-2.26□□□□□ -2.77
TY2A-LR1P0C2J4 YJL136W-AYJL136W-A 84 nt-2.27□□□□□ -2.77
TY2A-LR1P0C2J4 YJR162CYJR162C 351 nt-2.59□□□□□ -2.82
Retrieved 29 of 7,029 protein–RNA pairs in 44.6 ms