Protein–RNA interactions for Protein: P07903

Ercc1, DNA excision repair protein ERCC-1, mousemouse

Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1P07903 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ercc1P07903 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ercc1P07903 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ercc1P07903 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ercc1P07903 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ercc1P07903 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ercc1P07903 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC14.41□□□□□ -0.1
Ercc1P07903 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC14.41□□□□□ -0.1
Ercc1P07903 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ercc1P07903 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC14.41□□□□□ -0.1
Ercc1P07903 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ercc1P07903 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ercc1P07903 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ercc1P07903 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ercc1P07903 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Ercc1P07903 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ercc1P07903 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ercc1P07903 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ercc1P07903 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ercc1P07903 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ercc1P07903 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ercc1P07903 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ercc1P07903 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ercc1P07903 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ercc1P07903 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ercc1P07903 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ercc1P07903 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ercc1P07903 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC14.4□□□□□ -0.1
Ercc1P07903 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ercc1P07903 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Ercc1P07903 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ercc1P07903 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ercc1P07903 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ercc1P07903 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ercc1P07903 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ercc1P07903 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ercc1P07903 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ercc1P07903 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ercc1P07903 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ercc1P07903 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ercc1P07903 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ercc1P07903 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ercc1P07903 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Ercc1P07903 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC14.39□□□□□ -0.11
Ercc1P07903 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ercc1P07903 Mir8112-201ENSMUST00000184382 131 ntBASIC14.39□□□□□ -0.11
Ercc1P07903 Gm29791-202ENSMUST00000207888 369 ntBASIC14.39□□□□□ -0.11
Ercc1P07903 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ercc1P07903 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ercc1P07903 AC131586.2-201ENSMUST00000228370 1512 ntBASIC14.39□□□□□ -0.11
Ercc1P07903 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ercc1P07903 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ercc1P07903 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ercc1P07903 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ercc1P07903 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ercc1P07903 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ercc1P07903 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ercc1P07903 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ercc1P07903 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ercc1P07903 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ercc1P07903 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ercc1P07903 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ercc1P07903 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ercc1P07903 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ercc1P07903 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC14.38□□□□□ -0.11
Ercc1P07903 Gm18284-201ENSMUST00000172604 624 ntBASIC14.38□□□□□ -0.11
Ercc1P07903 Gm42642-201ENSMUST00000200683 355 ntBASIC14.38□□□□□ -0.11
Ercc1P07903 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ercc1P07903 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ercc1P07903 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ercc1P07903 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ercc1P07903 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ercc1P07903 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ercc1P07903 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ercc1P07903 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ercc1P07903 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ercc1P07903 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC14.38□□□□□ -0.11
Ercc1P07903 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ercc1P07903 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ercc1P07903 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ercc1P07903 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ercc1P07903 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ercc1P07903 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ercc1P07903 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ercc1P07903 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ercc1P07903 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ercc1P07903 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ercc1P07903 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ercc1P07903 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Ercc1P07903 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ercc1P07903 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ercc1P07903 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ercc1P07903 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ercc1P07903 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ercc1P07903 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC14.37□□□□□ -0.11
Ercc1P07903 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC14.37□□□□□ -0.11
Ercc1P07903 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ercc1P07903 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ercc1P07903 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC14.37□□□□□ -0.11
Ercc1P07903 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms