Protein–RNA interactions for Protein: P04819

CDC9, DNA ligase 1, yeastyeast

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC9P04819 YOR316C-AYOR316C-A 210 nt-0.54□□□□□ -2.5
CDC9P04819 YBR223W-AYBR223W-A 120 nt-0.58□□□□□ -2.5
CDC9P04819 snR33snR33 183 nt-0.6□□□□□ -2.51
CDC9P04819 YGR122C-AYGR122C-A 129 nt-0.63□□□□□ -2.51
CDC9P04819 YDL159W-AYDL159W-A 132 nt-0.64□□□□□ -2.51
CDC9P04819 YDL114W-AYDL114W-A 114 nt-0.75□□□□□ -2.53
CDC9P04819 snR77snR77 88 nt-0.79□□□□□ -2.54
CDC9P04819 tV(UAC)QtV(UAC)Q 76 nt-0.85□□□□□ -2.55
CDC9P04819 tP(UGG)QtP(UGG)Q 72 nt-0.93□□□□□ -2.56
CDC9P04819 YLR149C-AYLR149C-A 87 nt-0.96□□□□□ -2.56
CDC9P04819 CDC65tQ(CUG)M 72 nt-1.03□□□□□ -2.57
CDC9P04819 tY(GUA)QtY(GUA)Q 84 nt-1.15□□□□□ -2.59
CDC9P04819 YMR315W-AYMR315W-A 108 nt-1.19□□□□□ -2.6
CDC9P04819 YKL096C-BYKL096C-B 150 nt-1.22□□□□□ -2.6
CDC9P04819 YOL166W-AYOL166W-A 156 nt-1.22□□□□□ -2.6
CDC9P04819 YBR126W-BYBR126W-B 144 nt-1.28□□□□□ -2.61
CDC9P04819 YDR543CYDR543C 300 nt-1.29□□□□□ -2.62
CDC9P04819 RPL41BYDL133C-A 78 nt-1.32□□□□□ -2.62
CDC9P04819 snR6snR6 112 nt-1.38□□□□□ -2.63
CDC9P04819 YOR335W-AYOR335W-A 81 nt-1.43□□□□□ -2.64
CDC9P04819 YOR309CYOR309C 381 nt-1.5□□□□□ -2.65
CDC9P04819 snR73snR73 106 nt-1.6□□□□□ -2.67
CDC9P04819 snR40snR40 97 nt-1.7□□□□□ -2.68
CDC9P04819 snR75snR75 89 nt-1.76□□□□□ -2.69
CDC9P04819 YJR162CYJR162C 351 nt-2□□□□□ -2.73
CDC9P04819 snR58snR58 96 nt-2.06□□□□□ -2.74
CDC9P04819 tC(GCA)QtC(GCA)Q 76 nt-2.24□□□□□ -2.77
CDC9P04819 snR87snR87 109 nt-2.38□□□□□ -2.79
CDC9P04819 YJL136W-AYJL136W-A 84 nt-3.3□□□□□ -2.94
Retrieved 29 of 7,029 protein–RNA pairs in 5.4 ms