Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
P01852 Gm20472-201ENSMUST00000174403 1240 ntBASIC15.69■□□□□ 0.1
P01852 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
P01852 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P01852 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
P01852 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC15.69■□□□□ 0.1
P01852 Shroom3-211ENSMUST00000225438 5742 ntBASIC15.69■□□□□ 0.1
P01852 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
P01852 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
P01852 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
P01852 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
P01852 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC15.68■□□□□ 0.1
P01852 Gm30025-201ENSMUST00000218555 728 ntBASIC15.68■□□□□ 0.1
P01852 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
P01852 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
P01852 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
P01852 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
P01852 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
P01852 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
P01852 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
P01852 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
P01852 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
P01852 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
P01852 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
P01852 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
P01852 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC15.67■□□□□ 0.1
P01852 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
P01852 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
P01852 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
P01852 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
P01852 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
P01852 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
P01852 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
P01852 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC15.66■□□□□ 0.1
P01852 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
P01852 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
P01852 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
P01852 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
P01852 Gm15565-201ENSMUST00000118890 427 ntBASIC15.66■□□□□ 0.1
P01852 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
P01852 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
P01852 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC15.66■□□□□ 0.1
P01852 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
P01852 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC15.66■□□□□ 0.1
P01852 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
P01852 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
P01852 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
P01852 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
P01852 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
P01852 Gm43338-201ENSMUST00000198617 2223 ntBASIC15.66■□□□□ 0.1
P01852 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
P01852 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
P01852 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
P01852 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
P01852 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
P01852 Gm27463-201ENSMUST00000183569 57 ntBASIC15.65■□□□□ 0.1
P01852 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
P01852 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC15.65■□□□□ 0.1
P01852 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
P01852 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
P01852 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC15.65■□□□□ 0.1
P01852 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
P01852 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC15.65■□□□□ 0.1
P01852 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
P01852 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
P01852 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
P01852 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
P01852 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
P01852 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
P01852 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
P01852 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
P01852 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
P01852 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
P01852 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
P01852 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
P01852 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
P01852 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC15.64■□□□□ 0.09
P01852 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
P01852 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
P01852 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
P01852 Gm37025-201ENSMUST00000195159 829 ntBASIC15.64■□□□□ 0.09
P01852 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
P01852 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
P01852 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC15.64■□□□□ 0.09
P01852 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
P01852 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
P01852 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
P01852 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
P01852 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
P01852 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
P01852 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
P01852 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
P01852 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
P01852 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
P01852 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
P01852 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
P01852 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
P01852 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
P01852 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
P01852 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms