Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hdac3O88895 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hdac3O88895 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hdac3O88895 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Hdac3O88895 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hdac3O88895 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hdac3O88895 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Hdac3O88895 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hdac3O88895 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hdac3O88895 Gm15375-201ENSMUST00000119510 849 ntBASIC15.34■□□□□ 0.05
Hdac3O88895 Mir2861-201ENSMUST00000175539 82 ntBASIC15.34■□□□□ 0.05
Hdac3O88895 Gm29241-201ENSMUST00000189260 1096 ntBASIC15.34■□□□□ 0.05
Hdac3O88895 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Hdac3O88895 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hdac3O88895 Mtag2-201ENSMUST00000058665 714 ntBASIC15.34■□□□□ 0.05
Hdac3O88895 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hdac3O88895 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC15.34■□□□□ 0.05
Hdac3O88895 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Hdac3O88895 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC15.34■□□□□ 0.05
Hdac3O88895 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hdac3O88895 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hdac3O88895 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC15.34■□□□□ 0.05
Hdac3O88895 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC15.34■□□□□ 0.05
Hdac3O88895 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hdac3O88895 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Hdac3O88895 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Hdac3O88895 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Hdac3O88895 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Hdac3O88895 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Hdac3O88895 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Hdac3O88895 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Hdac3O88895 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hdac3O88895 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hdac3O88895 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hdac3O88895 Alkbh1-212ENSMUST00000185301 408 ntBASIC15.33■□□□□ 0.04
Hdac3O88895 Gm37856-201ENSMUST00000191634 999 ntBASIC15.33■□□□□ 0.04
Hdac3O88895 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Hdac3O88895 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hdac3O88895 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hdac3O88895 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hdac3O88895 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Hdac3O88895 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Hdac3O88895 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
Hdac3O88895 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.33■□□□□ 0.04
Hdac3O88895 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC15.33■□□□□ 0.04
Hdac3O88895 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC15.33■□□□□ 0.04
Hdac3O88895 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
Hdac3O88895 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hdac3O88895 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hdac3O88895 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC15.33■□□□□ 0.04
Hdac3O88895 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hdac3O88895 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hdac3O88895 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Hdac3O88895 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hdac3O88895 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Hdac3O88895 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hdac3O88895 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hdac3O88895 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hdac3O88895 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hdac3O88895 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hdac3O88895 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hdac3O88895 Gm20760-201ENSMUST00000179197 648 ntBASIC15.32■□□□□ 0.04
Hdac3O88895 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hdac3O88895 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
Hdac3O88895 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Hdac3O88895 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hdac3O88895 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Hdac3O88895 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hdac3O88895 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hdac3O88895 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hdac3O88895 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hdac3O88895 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hdac3O88895 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hdac3O88895 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hdac3O88895 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hdac3O88895 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Hdac3O88895 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC15.31■□□□□ 0.04
Hdac3O88895 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hdac3O88895 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC15.31■□□□□ 0.04
Hdac3O88895 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Hdac3O88895 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hdac3O88895 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Hdac3O88895 H2-K2-201ENSMUST00000174250 1049 ntBASIC15.31■□□□□ 0.04
Hdac3O88895 Trmt13-210ENSMUST00000198454 880 ntBASIC15.31■□□□□ 0.04
Hdac3O88895 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC15.31■□□□□ 0.04
Hdac3O88895 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hdac3O88895 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hdac3O88895 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC15.31■□□□□ 0.04
Hdac3O88895 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Hdac3O88895 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hdac3O88895 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Hdac3O88895 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hdac3O88895 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hdac3O88895 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hdac3O88895 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Hdac3O88895 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Hdac3O88895 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Hdac3O88895 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC15.3■□□□□ 0.04
Hdac3O88895 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Hdac3O88895 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms