Protein–RNA interactions for Protein: O70237

Gfi1b, Zinc finger protein Gfi-1b, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfi1bO70237 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Gfi1bO70237 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gfi1bO70237 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gfi1bO70237 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gfi1bO70237 Gm10655-201ENSMUST00000098658 1397 ntBASIC14.36□□□□□ -0.11
Gfi1bO70237 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Gfi1bO70237 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gfi1bO70237 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gfi1bO70237 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gfi1bO70237 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC14.36□□□□□ -0.11
Gfi1bO70237 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gfi1bO70237 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC14.36□□□□□ -0.11
Gfi1bO70237 Gm37179-201ENSMUST00000194862 823 ntBASIC14.36□□□□□ -0.11
Gfi1bO70237 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC14.36□□□□□ -0.11
Gfi1bO70237 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Gfi1bO70237 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gfi1bO70237 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Gfi1bO70237 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC14.36□□□□□ -0.11
Gfi1bO70237 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gfi1bO70237 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gfi1bO70237 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gfi1bO70237 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gfi1bO70237 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gfi1bO70237 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC14.35□□□□□ -0.11
Gfi1bO70237 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gfi1bO70237 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gfi1bO70237 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gfi1bO70237 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gfi1bO70237 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gfi1bO70237 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gfi1bO70237 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.35□□□□□ -0.11
Gfi1bO70237 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC14.35□□□□□ -0.11
Gfi1bO70237 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gfi1bO70237 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gfi1bO70237 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gfi1bO70237 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC14.35□□□□□ -0.11
Gfi1bO70237 Gm6420-201ENSMUST00000193885 723 ntBASIC14.35□□□□□ -0.11
Gfi1bO70237 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gfi1bO70237 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gfi1bO70237 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.35□□□□□ -0.11
Gfi1bO70237 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gfi1bO70237 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gfi1bO70237 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gfi1bO70237 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gfi1bO70237 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC14.35□□□□□ -0.11
Gfi1bO70237 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gfi1bO70237 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gfi1bO70237 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gfi1bO70237 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gfi1bO70237 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gfi1bO70237 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC14.34□□□□□ -0.11
Gfi1bO70237 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gfi1bO70237 Gm8309-201ENSMUST00000206627 1448 ntBASIC14.34□□□□□ -0.11
Gfi1bO70237 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gfi1bO70237 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gfi1bO70237 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gfi1bO70237 Nespas-201ENSMUST00000143738 1083 ntBASIC14.34□□□□□ -0.11
Gfi1bO70237 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC14.34□□□□□ -0.11
Gfi1bO70237 Gm19094-201ENSMUST00000209791 1246 ntBASIC14.34□□□□□ -0.11
Gfi1bO70237 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC14.34□□□□□ -0.11
Gfi1bO70237 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Gfi1bO70237 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gfi1bO70237 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gfi1bO70237 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gfi1bO70237 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gfi1bO70237 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gfi1bO70237 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.34□□□□□ -0.11
Gfi1bO70237 Gm44544-201ENSMUST00000207052 1844 ntBASIC14.34□□□□□ -0.11
Gfi1bO70237 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gfi1bO70237 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Gfi1bO70237 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Gfi1bO70237 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Gfi1bO70237 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Gfi1bO70237 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gfi1bO70237 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Gfi1bO70237 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gfi1bO70237 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gfi1bO70237 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Gfi1bO70237 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC14.33□□□□□ -0.12
Gfi1bO70237 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gfi1bO70237 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC14.33□□□□□ -0.12
Gfi1bO70237 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Gfi1bO70237 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gfi1bO70237 Gm9867-201ENSMUST00000192212 2647 ntBASIC14.33□□□□□ -0.12
Gfi1bO70237 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gfi1bO70237 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Gfi1bO70237 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gfi1bO70237 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Gfi1bO70237 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Gfi1bO70237 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gfi1bO70237 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gfi1bO70237 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gfi1bO70237 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gfi1bO70237 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gfi1bO70237 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gfi1bO70237 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gfi1bO70237 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gfi1bO70237 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gfi1bO70237 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gfi1bO70237 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms