Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Clcn6O35454 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Clcn6O35454 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Clcn6O35454 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Clcn6O35454 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Clcn6O35454 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Clcn6O35454 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Clcn6O35454 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Clcn6O35454 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Clcn6O35454 Gm37533-201ENSMUST00000193848 545 ntBASIC18.27■□□□□ 0.52
Clcn6O35454 Gm43692-201ENSMUST00000198236 1062 ntBASIC18.27■□□□□ 0.52
Clcn6O35454 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Clcn6O35454 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.27■□□□□ 0.52
Clcn6O35454 CT010431.1-201ENSMUST00000221249 1080 ntBASIC18.27■□□□□ 0.52
Clcn6O35454 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Clcn6O35454 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Clcn6O35454 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Clcn6O35454 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Clcn6O35454 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Clcn6O35454 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Clcn6O35454 4930532G15Rik-202ENSMUST00000195314 1457 ntBASIC18.26■□□□□ 0.51
Clcn6O35454 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Clcn6O35454 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Clcn6O35454 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Clcn6O35454 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Clcn6O35454 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Clcn6O35454 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
Clcn6O35454 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Clcn6O35454 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Clcn6O35454 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Clcn6O35454 Ssxb10-201ENSMUST00000103003 879 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Clcn6O35454 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Clcn6O35454 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.26■□□□□ 0.51
Clcn6O35454 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Clcn6O35454 Gm44985-201ENSMUST00000206202 1016 ntBASIC18.26■□□□□ 0.51
Clcn6O35454 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC18.26■□□□□ 0.51
Clcn6O35454 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Clcn6O35454 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.26■□□□□ 0.51
Clcn6O35454 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Clcn6O35454 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Clcn6O35454 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Clcn6O35454 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Clcn6O35454 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Clcn6O35454 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Clcn6O35454 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
Clcn6O35454 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Clcn6O35454 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Clcn6O35454 Zfp780b-203ENSMUST00000205874 1907 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Clcn6O35454 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Clcn6O35454 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Clcn6O35454 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Clcn6O35454 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.25■□□□□ 0.51
Clcn6O35454 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Clcn6O35454 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.25■□□□□ 0.51
Clcn6O35454 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Clcn6O35454 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Clcn6O35454 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Clcn6O35454 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Clcn6O35454 Gm7238-201ENSMUST00000206467 973 ntBASIC18.25■□□□□ 0.51
Clcn6O35454 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.25■□□□□ 0.51
Clcn6O35454 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Clcn6O35454 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Clcn6O35454 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Clcn6O35454 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Clcn6O35454 Olfr851-201ENSMUST00000064582 939 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Clcn6O35454 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Clcn6O35454 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Clcn6O35454 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Clcn6O35454 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Clcn6O35454 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Clcn6O35454 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Clcn6O35454 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Clcn6O35454 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Clcn6O35454 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Clcn6O35454 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.25■□□□□ 0.51
Clcn6O35454 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Clcn6O35454 4930593A02Rik-201ENSMUST00000181694 1437 ntTSL 5 BASIC18.24■□□□□ 0.51
Clcn6O35454 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Clcn6O35454 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Clcn6O35454 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.24■□□□□ 0.51
Clcn6O35454 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Clcn6O35454 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Clcn6O35454 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Clcn6O35454 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Clcn6O35454 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.24■□□□□ 0.51
Clcn6O35454 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Clcn6O35454 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Clcn6O35454 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Clcn6O35454 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Clcn6O35454 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
Clcn6O35454 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
Clcn6O35454 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Clcn6O35454 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Clcn6O35454 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Clcn6O35454 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Clcn6O35454 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Clcn6O35454 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.23■□□□□ 0.51
Clcn6O35454 Mir5133-201ENSMUST00000174955 77 ntBASIC18.23■□□□□ 0.51
Clcn6O35454 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Clcn6O35454 Gm9931-201ENSMUST00000193584 1185 ntBASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms