Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Alx4O35137 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC15.31■□□□□ 0.04
Alx4O35137 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Alx4O35137 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Alx4O35137 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Alx4O35137 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Alx4O35137 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Alx4O35137 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Alx4O35137 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Alx4O35137 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Alx4O35137 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC15.3■□□□□ 0.04
Alx4O35137 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Alx4O35137 Gm20628-201ENSMUST00000177363 3215 ntBASIC15.3■□□□□ 0.04
Alx4O35137 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Alx4O35137 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Alx4O35137 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC15.3■□□□□ 0.04
Alx4O35137 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Alx4O35137 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Alx4O35137 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Alx4O35137 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Alx4O35137 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Alx4O35137 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Alx4O35137 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Alx4O35137 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Alx4O35137 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Alx4O35137 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Alx4O35137 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Alx4O35137 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Alx4O35137 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Alx4O35137 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Alx4O35137 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Alx4O35137 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC15.29■□□□□ 0.04
Alx4O35137 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Alx4O35137 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Alx4O35137 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Alx4O35137 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Alx4O35137 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Alx4O35137 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Alx4O35137 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Alx4O35137 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Alx4O35137 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Alx4O35137 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Alx4O35137 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Alx4O35137 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Alx4O35137 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Alx4O35137 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Alx4O35137 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Alx4O35137 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Alx4O35137 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Alx4O35137 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Alx4O35137 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Alx4O35137 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Alx4O35137 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC15.28■□□□□ 0.04
Alx4O35137 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Alx4O35137 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Alx4O35137 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Alx4O35137 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Alx4O35137 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Alx4O35137 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Alx4O35137 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Alx4O35137 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Alx4O35137 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Alx4O35137 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Alx4O35137 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
Alx4O35137 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Alx4O35137 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Alx4O35137 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Alx4O35137 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Alx4O35137 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Alx4O35137 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Alx4O35137 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Alx4O35137 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Alx4O35137 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Alx4O35137 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Alx4O35137 Gm13148-201ENSMUST00000118892 745 ntBASIC15.27■□□□□ 0.04
Alx4O35137 Gm15375-201ENSMUST00000119510 849 ntBASIC15.27■□□□□ 0.04
Alx4O35137 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC15.27■□□□□ 0.04
Alx4O35137 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Alx4O35137 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Alx4O35137 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Alx4O35137 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Alx4O35137 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Alx4O35137 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Alx4O35137 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Alx4O35137 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Alx4O35137 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Alx4O35137 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Alx4O35137 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Alx4O35137 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Alx4O35137 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Alx4O35137 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Alx4O35137 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Alx4O35137 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Alx4O35137 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Alx4O35137 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Alx4O35137 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Alx4O35137 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Alx4O35137 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
Alx4O35137 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Alx4O35137 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms