Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Nkx1-1G3UXB3 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nkx1-1G3UXB3 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nkx1-1G3UXB3 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC19.56■□□□□ 0.72
Nkx1-1G3UXB3 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Nkx1-1G3UXB3 Gm11025-201ENSMUST00000140773 466 ntBASIC19.56■□□□□ 0.72
Nkx1-1G3UXB3 Gm16133-202ENSMUST00000160278 565 ntTSL 3 BASIC19.56■□□□□ 0.72
Nkx1-1G3UXB3 Mir6956-201ENSMUST00000183598 62 ntBASIC19.56■□□□□ 0.72
Nkx1-1G3UXB3 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Nkx1-1G3UXB3 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nkx1-1G3UXB3 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nkx1-1G3UXB3 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Nkx1-1G3UXB3 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nkx1-1G3UXB3 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nkx1-1G3UXB3 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Nkx1-1G3UXB3 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Nkx1-1G3UXB3 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Nkx1-1G3UXB3 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nkx1-1G3UXB3 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nkx1-1G3UXB3 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Nkx1-1G3UXB3 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC19.55■□□□□ 0.72
Nkx1-1G3UXB3 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Nkx1-1G3UXB3 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Nkx1-1G3UXB3 Gm37866-201ENSMUST00000191950 696 ntBASIC19.55■□□□□ 0.72
Nkx1-1G3UXB3 Gm43692-201ENSMUST00000198236 1062 ntBASIC19.55■□□□□ 0.72
Nkx1-1G3UXB3 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC19.55■□□□□ 0.72
Nkx1-1G3UXB3 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC19.55■□□□□ 0.72
Nkx1-1G3UXB3 Olfr258-ps1-202ENSMUST00000218625 1085 ntTSL 5 BASIC19.55■□□□□ 0.72
Nkx1-1G3UXB3 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nkx1-1G3UXB3 Tcf21-201ENSMUST00000049930 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nkx1-1G3UXB3 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nkx1-1G3UXB3 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.55■□□□□ 0.72
Nkx1-1G3UXB3 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Nkx1-1G3UXB3 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nkx1-1G3UXB3 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Nkx1-1G3UXB3 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Nkx1-1G3UXB3 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nkx1-1G3UXB3 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nkx1-1G3UXB3 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Nkx1-1G3UXB3 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nkx1-1G3UXB3 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nkx1-1G3UXB3 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.54■□□□□ 0.72
Nkx1-1G3UXB3 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nkx1-1G3UXB3 Gm3476-201ENSMUST00000112742 853 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Nkx1-1G3UXB3 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nkx1-1G3UXB3 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC19.54■□□□□ 0.72
Nkx1-1G3UXB3 Gm3344-201ENSMUST00000169610 603 ntBASIC19.54■□□□□ 0.72
Nkx1-1G3UXB3 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Nkx1-1G3UXB3 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC19.54■□□□□ 0.72
Nkx1-1G3UXB3 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Nkx1-1G3UXB3 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nkx1-1G3UXB3 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Nkx1-1G3UXB3 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nkx1-1G3UXB3 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Nkx1-1G3UXB3 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nkx1-1G3UXB3 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nkx1-1G3UXB3 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nkx1-1G3UXB3 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.53■□□□□ 0.72
Nkx1-1G3UXB3 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Nkx1-1G3UXB3 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nkx1-1G3UXB3 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nkx1-1G3UXB3 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nkx1-1G3UXB3 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nkx1-1G3UXB3 Gm25911-201ENSMUST00000157621 56 ntBASIC19.53■□□□□ 0.72
Nkx1-1G3UXB3 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Nkx1-1G3UXB3 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Nkx1-1G3UXB3 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC19.53■□□□□ 0.72
Nkx1-1G3UXB3 Gm7430-201ENSMUST00000193824 1144 ntBASIC19.53■□□□□ 0.72
Nkx1-1G3UXB3 Gm45574-201ENSMUST00000210921 331 ntBASIC19.53■□□□□ 0.72
Nkx1-1G3UXB3 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC19.53■□□□□ 0.72
Nkx1-1G3UXB3 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nkx1-1G3UXB3 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC19.53■□□□□ 0.72
Nkx1-1G3UXB3 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Nkx1-1G3UXB3 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.53■□□□□ 0.72
Nkx1-1G3UXB3 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nkx1-1G3UXB3 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nkx1-1G3UXB3 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nkx1-1G3UXB3 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nkx1-1G3UXB3 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Nkx1-1G3UXB3 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nkx1-1G3UXB3 Ifna16-201ENSMUST00000105148 1010 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Nkx1-1G3UXB3 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC19.52■□□□□ 0.72
Nkx1-1G3UXB3 Rprl3-201ENSMUST00000157400 290 ntBASIC19.52■□□□□ 0.72
Nkx1-1G3UXB3 Gm43767-201ENSMUST00000198933 381 ntBASIC19.52■□□□□ 0.72
Nkx1-1G3UXB3 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC19.52■□□□□ 0.72
Nkx1-1G3UXB3 Gm36278-201ENSMUST00000217030 918 ntTSL 5 BASIC19.52■□□□□ 0.72
Nkx1-1G3UXB3 Chchd1-203ENSMUST00000224633 557 ntBASIC19.52■□□□□ 0.72
Nkx1-1G3UXB3 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nkx1-1G3UXB3 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nkx1-1G3UXB3 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
Nkx1-1G3UXB3 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Nkx1-1G3UXB3 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Nkx1-1G3UXB3 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nkx1-1G3UXB3 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nkx1-1G3UXB3 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC19.51■□□□□ 0.71
Nkx1-1G3UXB3 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nkx1-1G3UXB3 AC125350.1-201ENSMUST00000225115 903 ntBASIC19.51■□□□□ 0.71
Nkx1-1G3UXB3 Ly96-201ENSMUST00000026881 632 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nkx1-1G3UXB3 Ifnb1-201ENSMUST00000055671 750 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Nkx1-1G3UXB3 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms