Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdh9F8VPK8 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdh9F8VPK8 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdh9F8VPK8 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Pcdh9F8VPK8 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Pcdh9F8VPK8 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Pcdh9F8VPK8 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdh9F8VPK8 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdh9F8VPK8 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdh9F8VPK8 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdh9F8VPK8 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.6■□□□□ 0.41
Pcdh9F8VPK8 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.6■□□□□ 0.41
Pcdh9F8VPK8 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdh9F8VPK8 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdh9F8VPK8 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdh9F8VPK8 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdh9F8VPK8 Gm37856-201ENSMUST00000191634 999 ntBASIC17.6■□□□□ 0.41
Pcdh9F8VPK8 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdh9F8VPK8 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdh9F8VPK8 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdh9F8VPK8 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdh9F8VPK8 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdh9F8VPK8 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdh9F8VPK8 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdh9F8VPK8 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdh9F8VPK8 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.6■□□□□ 0.41
Pcdh9F8VPK8 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdh9F8VPK8 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Pcdh9F8VPK8 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Pcdh9F8VPK8 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdh9F8VPK8 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdh9F8VPK8 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdh9F8VPK8 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdh9F8VPK8 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdh9F8VPK8 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Pcdh9F8VPK8 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdh9F8VPK8 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdh9F8VPK8 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdh9F8VPK8 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdh9F8VPK8 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdh9F8VPK8 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdh9F8VPK8 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdh9F8VPK8 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.59■□□□□ 0.41
Pcdh9F8VPK8 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdh9F8VPK8 Gm42545-201ENSMUST00000202755 922 ntBASIC17.59■□□□□ 0.41
Pcdh9F8VPK8 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdh9F8VPK8 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdh9F8VPK8 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Pcdh9F8VPK8 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdh9F8VPK8 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdh9F8VPK8 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdh9F8VPK8 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdh9F8VPK8 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdh9F8VPK8 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdh9F8VPK8 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Pcdh9F8VPK8 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdh9F8VPK8 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.58■□□□□ 0.41
Pcdh9F8VPK8 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.58■□□□□ 0.41
Pcdh9F8VPK8 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdh9F8VPK8 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdh9F8VPK8 Trmt13-210ENSMUST00000198454 880 ntBASIC17.58■□□□□ 0.4
Pcdh9F8VPK8 Gm4974-201ENSMUST00000209974 875 ntBASIC17.58■□□□□ 0.4
Pcdh9F8VPK8 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Pcdh9F8VPK8 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.58■□□□□ 0.4
Pcdh9F8VPK8 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdh9F8VPK8 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdh9F8VPK8 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Pcdh9F8VPK8 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Pcdh9F8VPK8 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdh9F8VPK8 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.57■□□□□ 0.4
Pcdh9F8VPK8 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdh9F8VPK8 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdh9F8VPK8 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdh9F8VPK8 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdh9F8VPK8 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdh9F8VPK8 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.57■□□□□ 0.4
Pcdh9F8VPK8 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Pcdh9F8VPK8 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.57■□□□□ 0.4
Pcdh9F8VPK8 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdh9F8VPK8 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdh9F8VPK8 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdh9F8VPK8 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdh9F8VPK8 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh9F8VPK8 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh9F8VPK8 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh9F8VPK8 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh9F8VPK8 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.56■□□□□ 0.4
Pcdh9F8VPK8 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.56■□□□□ 0.4
Pcdh9F8VPK8 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh9F8VPK8 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
Pcdh9F8VPK8 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Pcdh9F8VPK8 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh9F8VPK8 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh9F8VPK8 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
Pcdh9F8VPK8 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh9F8VPK8 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Pcdh9F8VPK8 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh9F8VPK8 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh9F8VPK8 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Pcdh9F8VPK8 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms