Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Atf6F6VAN0 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Atf6F6VAN0 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Atf6F6VAN0 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Atf6F6VAN0 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Atf6F6VAN0 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Atf6F6VAN0 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Atf6F6VAN0 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Atf6F6VAN0 Gm24841-201ENSMUST00000158676 357 ntBASIC17.62■□□□□ 0.41
Atf6F6VAN0 Gm8520-201ENSMUST00000186517 868 ntBASIC17.62■□□□□ 0.41
Atf6F6VAN0 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Atf6F6VAN0 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Atf6F6VAN0 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Atf6F6VAN0 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Atf6F6VAN0 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Atf6F6VAN0 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Atf6F6VAN0 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Atf6F6VAN0 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atf6F6VAN0 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atf6F6VAN0 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atf6F6VAN0 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atf6F6VAN0 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.61■□□□□ 0.41
Atf6F6VAN0 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atf6F6VAN0 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atf6F6VAN0 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Atf6F6VAN0 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atf6F6VAN0 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atf6F6VAN0 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Atf6F6VAN0 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atf6F6VAN0 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Atf6F6VAN0 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atf6F6VAN0 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.6■□□□□ 0.41
Atf6F6VAN0 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.6■□□□□ 0.41
Atf6F6VAN0 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atf6F6VAN0 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.6■□□□□ 0.41
Atf6F6VAN0 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atf6F6VAN0 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atf6F6VAN0 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Atf6F6VAN0 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atf6F6VAN0 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atf6F6VAN0 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atf6F6VAN0 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atf6F6VAN0 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atf6F6VAN0 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atf6F6VAN0 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Atf6F6VAN0 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atf6F6VAN0 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Atf6F6VAN0 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atf6F6VAN0 Mir1199-201ENSMUST00000117015 119 ntBASIC17.59■□□□□ 0.41
Atf6F6VAN0 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atf6F6VAN0 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atf6F6VAN0 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atf6F6VAN0 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atf6F6VAN0 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.59■□□□□ 0.41
Atf6F6VAN0 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Atf6F6VAN0 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atf6F6VAN0 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atf6F6VAN0 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.59■□□□□ 0.41
Atf6F6VAN0 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Atf6F6VAN0 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.58■□□□□ 0.41
Atf6F6VAN0 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Atf6F6VAN0 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Atf6F6VAN0 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Atf6F6VAN0 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Atf6F6VAN0 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Atf6F6VAN0 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.58■□□□□ 0.4
Atf6F6VAN0 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Atf6F6VAN0 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Atf6F6VAN0 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Atf6F6VAN0 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Atf6F6VAN0 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Atf6F6VAN0 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Atf6F6VAN0 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.58■□□□□ 0.4
Atf6F6VAN0 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.4
Atf6F6VAN0 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Atf6F6VAN0 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Atf6F6VAN0 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Atf6F6VAN0 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
Atf6F6VAN0 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Atf6F6VAN0 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Atf6F6VAN0 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Atf6F6VAN0 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Atf6F6VAN0 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Atf6F6VAN0 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Atf6F6VAN0 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Atf6F6VAN0 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.57■□□□□ 0.4
Atf6F6VAN0 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.57■□□□□ 0.4
Atf6F6VAN0 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Atf6F6VAN0 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Atf6F6VAN0 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Atf6F6VAN0 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Atf6F6VAN0 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Atf6F6VAN0 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Atf6F6VAN0 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Atf6F6VAN0 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Atf6F6VAN0 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.57■□□□□ 0.4
Atf6F6VAN0 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Atf6F6VAN0 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atf6F6VAN0 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atf6F6VAN0 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms