Protein–RNA interactions for Protein: A0A140T8Q4

Igkv3-4, Immunoglobulin kappa variable 3-4 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-4A0A140T8Q4 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Igkv3-4A0A140T8Q4 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Igkv3-4A0A140T8Q4 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC10.77□□□□□ -0.69
Igkv3-4A0A140T8Q4 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Igkv3-4A0A140T8Q4 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Igkv3-4A0A140T8Q4 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Igkv3-4A0A140T8Q4 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Igkv3-4A0A140T8Q4 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Igkv3-4A0A140T8Q4 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Igkv3-4A0A140T8Q4 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Igkv3-4A0A140T8Q4 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC10.76□□□□□ -0.69
Igkv3-4A0A140T8Q4 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC10.76□□□□□ -0.69
Igkv3-4A0A140T8Q4 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC10.76□□□□□ -0.69
Igkv3-4A0A140T8Q4 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Igkv3-4A0A140T8Q4 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Igkv3-4A0A140T8Q4 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
Igkv3-4A0A140T8Q4 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC10.76□□□□□ -0.69
Igkv3-4A0A140T8Q4 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Igkv3-4A0A140T8Q4 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Igkv3-4A0A140T8Q4 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC10.76□□□□□ -0.69
Igkv3-4A0A140T8Q4 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Igkv3-4A0A140T8Q4 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Igkv3-4A0A140T8Q4 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Igkv3-4A0A140T8Q4 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Igkv3-4A0A140T8Q4 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Igkv3-4A0A140T8Q4 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Igkv3-4A0A140T8Q4 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Igkv3-4A0A140T8Q4 Gm42778-201ENSMUST00000199644 553 ntBASIC10.76□□□□□ -0.69
Igkv3-4A0A140T8Q4 AC160393.1-201ENSMUST00000218378 1279 ntBASIC10.76□□□□□ -0.69
Igkv3-4A0A140T8Q4 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Igkv3-4A0A140T8Q4 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC10.76□□□□□ -0.69
Igkv3-4A0A140T8Q4 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Igkv3-4A0A140T8Q4 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Igkv3-4A0A140T8Q4 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Igkv3-4A0A140T8Q4 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Igkv3-4A0A140T8Q4 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Igkv3-4A0A140T8Q4 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Igkv3-4A0A140T8Q4 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Igkv3-4A0A140T8Q4 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Igkv3-4A0A140T8Q4 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Igkv3-4A0A140T8Q4 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Igkv3-4A0A140T8Q4 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Igkv3-4A0A140T8Q4 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC10.76□□□□□ -0.69
Igkv3-4A0A140T8Q4 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Igkv3-4A0A140T8Q4 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Igkv3-4A0A140T8Q4 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Igkv3-4A0A140T8Q4 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Igkv3-4A0A140T8Q4 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Igkv3-4A0A140T8Q4 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Igkv3-4A0A140T8Q4 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv3-4A0A140T8Q4 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv3-4A0A140T8Q4 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv3-4A0A140T8Q4 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv3-4A0A140T8Q4 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv3-4A0A140T8Q4 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv3-4A0A140T8Q4 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC10.75□□□□□ -0.69
Igkv3-4A0A140T8Q4 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv3-4A0A140T8Q4 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv3-4A0A140T8Q4 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Igkv3-4A0A140T8Q4 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv3-4A0A140T8Q4 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv3-4A0A140T8Q4 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv3-4A0A140T8Q4 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv3-4A0A140T8Q4 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv3-4A0A140T8Q4 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv3-4A0A140T8Q4 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv3-4A0A140T8Q4 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC10.75□□□□□ -0.69
Igkv3-4A0A140T8Q4 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv3-4A0A140T8Q4 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv3-4A0A140T8Q4 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv3-4A0A140T8Q4 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv3-4A0A140T8Q4 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv3-4A0A140T8Q4 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv3-4A0A140T8Q4 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv3-4A0A140T8Q4 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Igkv3-4A0A140T8Q4 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv3-4A0A140T8Q4 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC10.75□□□□□ -0.69
Igkv3-4A0A140T8Q4 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Igkv3-4A0A140T8Q4 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv3-4A0A140T8Q4 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Igkv3-4A0A140T8Q4 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv3-4A0A140T8Q4 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv3-4A0A140T8Q4 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv3-4A0A140T8Q4 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Igkv3-4A0A140T8Q4 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Igkv3-4A0A140T8Q4 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC10.74□□□□□ -0.69
Igkv3-4A0A140T8Q4 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Igkv3-4A0A140T8Q4 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Igkv3-4A0A140T8Q4 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Igkv3-4A0A140T8Q4 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Igkv3-4A0A140T8Q4 Pcgf5-211ENSMUST00000225920 6443 ntBASIC10.74□□□□□ -0.69
Igkv3-4A0A140T8Q4 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Igkv3-4A0A140T8Q4 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Igkv3-4A0A140T8Q4 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Igkv3-4A0A140T8Q4 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Igkv3-4A0A140T8Q4 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC10.74□□□□□ -0.69
Igkv3-4A0A140T8Q4 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Igkv3-4A0A140T8Q4 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC10.74□□□□□ -0.69
Igkv3-4A0A140T8Q4 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC10.74□□□□□ -0.69
Igkv3-4A0A140T8Q4 Gm26971-201ENSMUST00000182423 1072 ntBASIC10.74□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms