Protein–RNA interactions for Protein: A0A140T8P2

Igkv6-20, Immunoglobulin kappa variable 6-20 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv6-20A0A140T8P2 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Igkv6-20A0A140T8P2 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.46■□□□□ 0.23
Igkv6-20A0A140T8P2 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Igkv6-20A0A140T8P2 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Igkv6-20A0A140T8P2 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.46■□□□□ 0.23
Igkv6-20A0A140T8P2 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Igkv6-20A0A140T8P2 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.46■□□□□ 0.23
Igkv6-20A0A140T8P2 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Igkv6-20A0A140T8P2 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Igkv6-20A0A140T8P2 Gm11950-201ENSMUST00000121615 838 ntBASIC16.46■□□□□ 0.23
Igkv6-20A0A140T8P2 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Igkv6-20A0A140T8P2 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Igkv6-20A0A140T8P2 Gm27704-201ENSMUST00000185094 107 ntBASIC16.46■□□□□ 0.23
Igkv6-20A0A140T8P2 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Igkv6-20A0A140T8P2 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Igkv6-20A0A140T8P2 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Igkv6-20A0A140T8P2 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.46■□□□□ 0.23
Igkv6-20A0A140T8P2 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Igkv6-20A0A140T8P2 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Igkv6-20A0A140T8P2 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Igkv6-20A0A140T8P2 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Igkv6-20A0A140T8P2 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.45■□□□□ 0.22
Igkv6-20A0A140T8P2 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Igkv6-20A0A140T8P2 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.45■□□□□ 0.22
Igkv6-20A0A140T8P2 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Igkv6-20A0A140T8P2 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Igkv6-20A0A140T8P2 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Igkv6-20A0A140T8P2 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Igkv6-20A0A140T8P2 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Igkv6-20A0A140T8P2 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Igkv6-20A0A140T8P2 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Igkv6-20A0A140T8P2 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Igkv6-20A0A140T8P2 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Igkv6-20A0A140T8P2 Mir770-201ENSMUST00000103252 94 ntBASIC16.44■□□□□ 0.22
Igkv6-20A0A140T8P2 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Igkv6-20A0A140T8P2 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Igkv6-20A0A140T8P2 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.44■□□□□ 0.22
Igkv6-20A0A140T8P2 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Igkv6-20A0A140T8P2 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Igkv6-20A0A140T8P2 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Igkv6-20A0A140T8P2 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Igkv6-20A0A140T8P2 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Igkv6-20A0A140T8P2 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Igkv6-20A0A140T8P2 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Igkv6-20A0A140T8P2 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Igkv6-20A0A140T8P2 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.43■□□□□ 0.22
Igkv6-20A0A140T8P2 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC16.43■□□□□ 0.22
Igkv6-20A0A140T8P2 Ank2-226ENSMUST00000189368 339 ntBASIC16.43■□□□□ 0.22
Igkv6-20A0A140T8P2 AC130713.1-201ENSMUST00000228853 1096 ntBASIC16.43■□□□□ 0.22
Igkv6-20A0A140T8P2 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Igkv6-20A0A140T8P2 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Igkv6-20A0A140T8P2 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Igkv6-20A0A140T8P2 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Igkv6-20A0A140T8P2 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Igkv6-20A0A140T8P2 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Igkv6-20A0A140T8P2 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Igkv6-20A0A140T8P2 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Igkv6-20A0A140T8P2 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Igkv6-20A0A140T8P2 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Igkv6-20A0A140T8P2 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Igkv6-20A0A140T8P2 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Igkv6-20A0A140T8P2 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Igkv6-20A0A140T8P2 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Igkv6-20A0A140T8P2 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
Igkv6-20A0A140T8P2 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Igkv6-20A0A140T8P2 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.42■□□□□ 0.22
Igkv6-20A0A140T8P2 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Igkv6-20A0A140T8P2 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Igkv6-20A0A140T8P2 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Igkv6-20A0A140T8P2 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Igkv6-20A0A140T8P2 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC16.42■□□□□ 0.22
Igkv6-20A0A140T8P2 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Igkv6-20A0A140T8P2 Gm11336-201ENSMUST00000118168 334 ntBASIC16.42■□□□□ 0.22
Igkv6-20A0A140T8P2 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
Igkv6-20A0A140T8P2 Gm6623-201ENSMUST00000173570 544 ntBASIC16.42■□□□□ 0.22
Igkv6-20A0A140T8P2 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.42■□□□□ 0.22
Igkv6-20A0A140T8P2 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.42■□□□□ 0.22
Igkv6-20A0A140T8P2 Gm18115-201ENSMUST00000221209 621 ntBASIC16.42■□□□□ 0.22
Igkv6-20A0A140T8P2 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.42■□□□□ 0.22
Igkv6-20A0A140T8P2 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Igkv6-20A0A140T8P2 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Igkv6-20A0A140T8P2 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Igkv6-20A0A140T8P2 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Igkv6-20A0A140T8P2 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Igkv6-20A0A140T8P2 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Igkv6-20A0A140T8P2 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
Igkv6-20A0A140T8P2 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Igkv6-20A0A140T8P2 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Igkv6-20A0A140T8P2 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Igkv6-20A0A140T8P2 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Igkv6-20A0A140T8P2 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Igkv6-20A0A140T8P2 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Igkv6-20A0A140T8P2 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Igkv6-20A0A140T8P2 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Igkv6-20A0A140T8P2 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Igkv6-20A0A140T8P2 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Igkv6-20A0A140T8P2 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Igkv6-20A0A140T8P2 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Igkv6-20A0A140T8P2 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Igkv6-20A0A140T8P2 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms