Protein–RNA interactions for Protein: A0A0G2JGQ7

Trav15d-2-dv6d-2, T cell receptor alpha variable 15D-2-DV6D-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-2-dv6d-2A0A0G2JGQ7 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav15d-2-dv6d-2A0A0G2JGQ7 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC15.06■□□□□ 0
Trav15d-2-dv6d-2A0A0G2JGQ7 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav15d-2-dv6d-2A0A0G2JGQ7 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC15.05■□□□□ 0
Trav15d-2-dv6d-2A0A0G2JGQ7 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav15d-2-dv6d-2A0A0G2JGQ7 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Trav15d-2-dv6d-2A0A0G2JGQ7 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC15.05■□□□□ -0
Trav15d-2-dv6d-2A0A0G2JGQ7 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
Trav15d-2-dv6d-2A0A0G2JGQ7 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC15.05■□□□□ -0
Trav15d-2-dv6d-2A0A0G2JGQ7 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav15d-2-dv6d-2A0A0G2JGQ7 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm4974-201ENSMUST00000209974 875 ntBASIC15.05■□□□□ -0
Trav15d-2-dv6d-2A0A0G2JGQ7 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav15d-2-dv6d-2A0A0G2JGQ7 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav15d-2-dv6d-2A0A0G2JGQ7 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav15d-2-dv6d-2A0A0G2JGQ7 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Trav15d-2-dv6d-2A0A0G2JGQ7 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC15.05■□□□□ -0
Trav15d-2-dv6d-2A0A0G2JGQ7 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Trav15d-2-dv6d-2A0A0G2JGQ7 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav15d-2-dv6d-2A0A0G2JGQ7 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav15d-2-dv6d-2A0A0G2JGQ7 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC15.05■□□□□ -0
Trav15d-2-dv6d-2A0A0G2JGQ7 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav15d-2-dv6d-2A0A0G2JGQ7 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav15d-2-dv6d-2A0A0G2JGQ7 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav15d-2-dv6d-2A0A0G2JGQ7 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav15d-2-dv6d-2A0A0G2JGQ7 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Trav15d-2-dv6d-2A0A0G2JGQ7 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Trav15d-2-dv6d-2A0A0G2JGQ7 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav15d-2-dv6d-2A0A0G2JGQ7 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav15d-2-dv6d-2A0A0G2JGQ7 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav15d-2-dv6d-2A0A0G2JGQ7 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav15d-2-dv6d-2A0A0G2JGQ7 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav15d-2-dv6d-2A0A0G2JGQ7 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Trav15d-2-dv6d-2A0A0G2JGQ7 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm27275-201ENSMUST00000184318 272 ntBASIC15.04■□□□□ -0
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC15.04■□□□□ -0
Trav15d-2-dv6d-2A0A0G2JGQ7 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Trav15d-2-dv6d-2A0A0G2JGQ7 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trav15d-2-dv6d-2A0A0G2JGQ7 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav15d-2-dv6d-2A0A0G2JGQ7 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Trav15d-2-dv6d-2A0A0G2JGQ7 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav15d-2-dv6d-2A0A0G2JGQ7 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav15d-2-dv6d-2A0A0G2JGQ7 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
Trav15d-2-dv6d-2A0A0G2JGQ7 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav15d-2-dv6d-2A0A0G2JGQ7 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC15.03■□□□□ -0
Trav15d-2-dv6d-2A0A0G2JGQ7 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav15d-2-dv6d-2A0A0G2JGQ7 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav15d-2-dv6d-2A0A0G2JGQ7 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav15d-2-dv6d-2A0A0G2JGQ7 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav15d-2-dv6d-2A0A0G2JGQ7 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC15.03■□□□□ -0
Trav15d-2-dv6d-2A0A0G2JGQ7 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav15d-2-dv6d-2A0A0G2JGQ7 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm37292-201ENSMUST00000192062 758 ntBASIC15.03■□□□□ -0
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC15.03■□□□□ -0
Trav15d-2-dv6d-2A0A0G2JGQ7 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav15d-2-dv6d-2A0A0G2JGQ7 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav15d-2-dv6d-2A0A0G2JGQ7 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav15d-2-dv6d-2A0A0G2JGQ7 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav15d-2-dv6d-2A0A0G2JGQ7 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav15d-2-dv6d-2A0A0G2JGQ7 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav15d-2-dv6d-2A0A0G2JGQ7 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav15d-2-dv6d-2A0A0G2JGQ7 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Trav15d-2-dv6d-2A0A0G2JGQ7 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Trav15d-2-dv6d-2A0A0G2JGQ7 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav15d-2-dv6d-2A0A0G2JGQ7 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
Trav15d-2-dv6d-2A0A0G2JGQ7 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC15.02■□□□□ -0
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC15.02■□□□□ -0
Trav15d-2-dv6d-2A0A0G2JGQ7 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC15.02■□□□□ -0
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm20049-201ENSMUST00000219950 730 ntBASIC15.02■□□□□ -0
Trav15d-2-dv6d-2A0A0G2JGQ7 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC15.02□□□□□ -0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC15.01□□□□□ -0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC15.01□□□□□ -0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms