Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC11.85□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC11.85□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav13d-4A0A0G2JFX3 AC108858.1-201ENSMUST00000228461 1498 ntBASIC11.84□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC11.84□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
Trav13d-4A0A0G2JFX3 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Gm29791-202ENSMUST00000207888 369 ntBASIC11.84□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC11.84□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC11.84□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC11.84□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Trav13d-4A0A0G2JFX3 AC125311.2-201ENSMUST00000227477 1940 ntBASIC11.84□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC11.84□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC11.84□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC11.83□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Gm2399-201ENSMUST00000104944 225 ntBASIC11.83□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC11.83□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC11.83□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC11.83□□□□□ -0.52
Trav13d-4A0A0G2JFX3 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC11.83□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC11.83□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC11.83□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC11.83□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Gm44443-201ENSMUST00000204396 5633 ntBASIC11.82□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13d-4A0A0G2JFX3 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13d-4A0A0G2JFX3 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13d-4A0A0G2JFX3 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms