Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Trav3n-3A0A0G2JEM0 AC121961.1-201ENSMUST00000218594 1779 ntBASIC13.02□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Gm13146-201ENSMUST00000118508 780 ntBASIC13.02□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC13.02□□□□□ -0.33
Trav3n-3A0A0G2JEM0 CT010467.1-202ENSMUST00000205406 714 ntBASIC13.02□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC13.02□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav3n-3A0A0G2JEM0 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC13.02□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC13.02□□□□□ -0.33
Trav3n-3A0A0G2JEM0 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav3n-3A0A0G2JEM0 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC13.02□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC13.02□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC13.02□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Gm16401-202ENSMUST00000197463 2074 ntBASIC13.01□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC13.01□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC13.01□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Gm45417-201ENSMUST00000209533 758 ntBASIC13.01□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC13.01□□□□□ -0.33
Trav3n-3A0A0G2JEM0 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC13.01□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC13.01□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav3n-3A0A0G2JEM0 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav3n-3A0A0G2JEM0 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC13.01□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav3n-3A0A0G2JEM0 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC13.01□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC13.01□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC13□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC13□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Gm10167-201ENSMUST00000150411 1479 ntBASIC13□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC13□□□□□ -0.33
Trav3n-3A0A0G2JEM0 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC13□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Gm26971-201ENSMUST00000182423 1072 ntBASIC13□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms