Protein–RNA interactions for Protein: A0A0G2JE47

Igkv8-28, Immunoglobulin kappa variable 8-28 (Fragment), mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-28A0A0G2JE47 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Igkv8-28A0A0G2JE47 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Igkv8-28A0A0G2JE47 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Igkv8-28A0A0G2JE47 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Igkv8-28A0A0G2JE47 AC165080.2-201ENSMUST00000217491 1530 ntBASIC10.78□□□□□ -0.68
Igkv8-28A0A0G2JE47 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Igkv8-28A0A0G2JE47 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Igkv8-28A0A0G2JE47 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Igkv8-28A0A0G2JE47 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Igkv8-28A0A0G2JE47 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Igkv8-28A0A0G2JE47 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Igkv8-28A0A0G2JE47 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC10.78□□□□□ -0.68
Igkv8-28A0A0G2JE47 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Igkv8-28A0A0G2JE47 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Igkv8-28A0A0G2JE47 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
Igkv8-28A0A0G2JE47 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC10.77□□□□□ -0.68
Igkv8-28A0A0G2JE47 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
Igkv8-28A0A0G2JE47 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Igkv8-28A0A0G2JE47 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Igkv8-28A0A0G2JE47 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Igkv8-28A0A0G2JE47 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC10.77□□□□□ -0.69
Igkv8-28A0A0G2JE47 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Igkv8-28A0A0G2JE47 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Igkv8-28A0A0G2JE47 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC10.77□□□□□ -0.69
Igkv8-28A0A0G2JE47 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC10.77□□□□□ -0.69
Igkv8-28A0A0G2JE47 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Igkv8-28A0A0G2JE47 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC10.77□□□□□ -0.69
Igkv8-28A0A0G2JE47 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC10.77□□□□□ -0.69
Igkv8-28A0A0G2JE47 Gm26971-201ENSMUST00000182423 1072 ntBASIC10.77□□□□□ -0.69
Igkv8-28A0A0G2JE47 Gm27801-201ENSMUST00000184174 223 ntBASIC10.77□□□□□ -0.69
Igkv8-28A0A0G2JE47 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Igkv8-28A0A0G2JE47 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC10.77□□□□□ -0.69
Igkv8-28A0A0G2JE47 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Igkv8-28A0A0G2JE47 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Igkv8-28A0A0G2JE47 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Igkv8-28A0A0G2JE47 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Igkv8-28A0A0G2JE47 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Igkv8-28A0A0G2JE47 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Igkv8-28A0A0G2JE47 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Igkv8-28A0A0G2JE47 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Igkv8-28A0A0G2JE47 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC10.77□□□□□ -0.69
Igkv8-28A0A0G2JE47 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Igkv8-28A0A0G2JE47 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Igkv8-28A0A0G2JE47 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Igkv8-28A0A0G2JE47 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Igkv8-28A0A0G2JE47 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Igkv8-28A0A0G2JE47 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Igkv8-28A0A0G2JE47 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Igkv8-28A0A0G2JE47 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Igkv8-28A0A0G2JE47 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC10.76□□□□□ -0.69
Igkv8-28A0A0G2JE47 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC10.76□□□□□ -0.69
Igkv8-28A0A0G2JE47 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Igkv8-28A0A0G2JE47 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC10.76□□□□□ -0.69
Igkv8-28A0A0G2JE47 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Igkv8-28A0A0G2JE47 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Igkv8-28A0A0G2JE47 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Igkv8-28A0A0G2JE47 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Igkv8-28A0A0G2JE47 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Igkv8-28A0A0G2JE47 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Igkv8-28A0A0G2JE47 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Igkv8-28A0A0G2JE47 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Igkv8-28A0A0G2JE47 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Igkv8-28A0A0G2JE47 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Igkv8-28A0A0G2JE47 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC10.76□□□□□ -0.69
Igkv8-28A0A0G2JE47 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Igkv8-28A0A0G2JE47 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Igkv8-28A0A0G2JE47 Gm11841-201ENSMUST00000117060 1963 ntBASIC10.76□□□□□ -0.69
Igkv8-28A0A0G2JE47 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Igkv8-28A0A0G2JE47 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Igkv8-28A0A0G2JE47 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC10.76□□□□□ -0.69
Igkv8-28A0A0G2JE47 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Igkv8-28A0A0G2JE47 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Igkv8-28A0A0G2JE47 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Igkv8-28A0A0G2JE47 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Igkv8-28A0A0G2JE47 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Igkv8-28A0A0G2JE47 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC10.76□□□□□ -0.69
Igkv8-28A0A0G2JE47 Wdr70-203ENSMUST00000227371 1130 ntBASIC10.76□□□□□ -0.69
Igkv8-28A0A0G2JE47 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Igkv8-28A0A0G2JE47 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Igkv8-28A0A0G2JE47 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Igkv8-28A0A0G2JE47 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Igkv8-28A0A0G2JE47 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC10.76□□□□□ -0.69
Igkv8-28A0A0G2JE47 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Igkv8-28A0A0G2JE47 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Igkv8-28A0A0G2JE47 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Igkv8-28A0A0G2JE47 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Igkv8-28A0A0G2JE47 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Igkv8-28A0A0G2JE47 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Igkv8-28A0A0G2JE47 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Igkv8-28A0A0G2JE47 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv8-28A0A0G2JE47 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC10.75□□□□□ -0.69
Igkv8-28A0A0G2JE47 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv8-28A0A0G2JE47 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv8-28A0A0G2JE47 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv8-28A0A0G2JE47 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv8-28A0A0G2JE47 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv8-28A0A0G2JE47 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv8-28A0A0G2JE47 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv8-28A0A0G2JE47 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv8-28A0A0G2JE47 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms