Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav4-3A0A0B4J1K1 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav4-3A0A0B4J1K1 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav4-3A0A0B4J1K1 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav4-3A0A0B4J1K1 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav4-3A0A0B4J1K1 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav4-3A0A0B4J1K1 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav4-3A0A0B4J1K1 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Trav4-3A0A0B4J1K1 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Trav4-3A0A0B4J1K1 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav4-3A0A0B4J1K1 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav4-3A0A0B4J1K1 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav4-3A0A0B4J1K1 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav4-3A0A0B4J1K1 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav4-3A0A0B4J1K1 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav4-3A0A0B4J1K1 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav4-3A0A0B4J1K1 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav4-3A0A0B4J1K1 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav4-3A0A0B4J1K1 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav4-3A0A0B4J1K1 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav4-3A0A0B4J1K1 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav4-3A0A0B4J1K1 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav4-3A0A0B4J1K1 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav4-3A0A0B4J1K1 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav4-3A0A0B4J1K1 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav4-3A0A0B4J1K1 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC11.73□□□□□ -0.53
Trav4-3A0A0B4J1K1 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Trav4-3A0A0B4J1K1 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav4-3A0A0B4J1K1 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav4-3A0A0B4J1K1 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC11.73□□□□□ -0.53
Trav4-3A0A0B4J1K1 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav4-3A0A0B4J1K1 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav4-3A0A0B4J1K1 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav4-3A0A0B4J1K1 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav4-3A0A0B4J1K1 Gm9847-201ENSMUST00000052528 599 ntBASIC11.73□□□□□ -0.53
Trav4-3A0A0B4J1K1 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trav4-3A0A0B4J1K1 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav4-3A0A0B4J1K1 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav4-3A0A0B4J1K1 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav4-3A0A0B4J1K1 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav4-3A0A0B4J1K1 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav4-3A0A0B4J1K1 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav4-3A0A0B4J1K1 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav4-3A0A0B4J1K1 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav4-3A0A0B4J1K1 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Trav4-3A0A0B4J1K1 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav4-3A0A0B4J1K1 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC11.72□□□□□ -0.53
Trav4-3A0A0B4J1K1 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
Trav4-3A0A0B4J1K1 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav4-3A0A0B4J1K1 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Trav4-3A0A0B4J1K1 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav4-3A0A0B4J1K1 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav4-3A0A0B4J1K1 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC11.72□□□□□ -0.53
Trav4-3A0A0B4J1K1 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Trav4-3A0A0B4J1K1 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC11.72□□□□□ -0.53
Trav4-3A0A0B4J1K1 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav4-3A0A0B4J1K1 Gm12251-201ENSMUST00000117893 792 ntBASIC11.72□□□□□ -0.53
Trav4-3A0A0B4J1K1 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC11.72□□□□□ -0.53
Trav4-3A0A0B4J1K1 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav4-3A0A0B4J1K1 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav4-3A0A0B4J1K1 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav4-3A0A0B4J1K1 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC11.72□□□□□ -0.53
Trav4-3A0A0B4J1K1 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav4-3A0A0B4J1K1 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Trav4-3A0A0B4J1K1 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav4-3A0A0B4J1K1 Gm44443-201ENSMUST00000204396 5633 ntBASIC11.72□□□□□ -0.53
Trav4-3A0A0B4J1K1 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Trav4-3A0A0B4J1K1 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav4-3A0A0B4J1K1 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav4-3A0A0B4J1K1 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav4-3A0A0B4J1K1 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav4-3A0A0B4J1K1 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav4-3A0A0B4J1K1 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav4-3A0A0B4J1K1 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav4-3A0A0B4J1K1 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav4-3A0A0B4J1K1 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav4-3A0A0B4J1K1 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC11.71□□□□□ -0.53
Trav4-3A0A0B4J1K1 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav4-3A0A0B4J1K1 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav4-3A0A0B4J1K1 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav4-3A0A0B4J1K1 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav4-3A0A0B4J1K1 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav4-3A0A0B4J1K1 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav4-3A0A0B4J1K1 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC11.71□□□□□ -0.53
Trav4-3A0A0B4J1K1 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav4-3A0A0B4J1K1 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav4-3A0A0B4J1K1 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav4-3A0A0B4J1K1 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav4-3A0A0B4J1K1 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav4-3A0A0B4J1K1 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav4-3A0A0B4J1K1 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav4-3A0A0B4J1K1 Gm14281-201ENSMUST00000121700 1294 ntBASIC11.71□□□□□ -0.53
Trav4-3A0A0B4J1K1 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav4-3A0A0B4J1K1 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC11.71□□□□□ -0.53
Trav4-3A0A0B4J1K1 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC11.71□□□□□ -0.53
Trav4-3A0A0B4J1K1 Gm43137-201ENSMUST00000198052 594 ntBASIC11.71□□□□□ -0.53
Trav4-3A0A0B4J1K1 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav4-3A0A0B4J1K1 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav4-3A0A0B4J1K1 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Trav4-3A0A0B4J1K1 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms